| Full name: coiled-coil domain containing 93 | Alias Symbol: FLJ10996 | ||
| Type: protein-coding gene | Cytoband: 2q14.1 | ||
| Entrez ID: 54520 | HGNC ID: HGNC:25611 | Ensembl Gene: ENSG00000125633 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Screen Evidence:
| |||
Expression of CCDC93:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CCDC93 | 54520 | 209688_s_at | 0.9258 | 0.0898 | |
| GSE20347 | CCDC93 | 54520 | 209688_s_at | 0.4207 | 0.0129 | |
| GSE23400 | CCDC93 | 54520 | 209688_s_at | 0.2410 | 0.0003 | |
| GSE26886 | CCDC93 | 54520 | 209688_s_at | -0.0801 | 0.8000 | |
| GSE29001 | CCDC93 | 54520 | 209688_s_at | 0.6367 | 0.0110 | |
| GSE38129 | CCDC93 | 54520 | 209688_s_at | 0.4669 | 0.0197 | |
| GSE45670 | CCDC93 | 54520 | 209688_s_at | 0.3274 | 0.0170 | |
| GSE53622 | CCDC93 | 54520 | 42549 | 0.1431 | 0.0805 | |
| GSE53624 | CCDC93 | 54520 | 42549 | 0.3069 | 0.0000 | |
| GSE63941 | CCDC93 | 54520 | 209688_s_at | -1.2412 | 0.0076 | |
| GSE77861 | CCDC93 | 54520 | 209688_s_at | 0.5050 | 0.0098 | |
| GSE97050 | CCDC93 | 54520 | A_23_P79661 | -0.1691 | 0.4997 | |
| SRP007169 | CCDC93 | 54520 | RNAseq | 1.4089 | 0.0002 | |
| SRP008496 | CCDC93 | 54520 | RNAseq | 1.0807 | 0.0004 | |
| SRP064894 | CCDC93 | 54520 | RNAseq | 0.2625 | 0.2250 | |
| SRP133303 | CCDC93 | 54520 | RNAseq | 0.2010 | 0.0774 | |
| SRP159526 | CCDC93 | 54520 | RNAseq | 0.1004 | 0.5153 | |
| SRP193095 | CCDC93 | 54520 | RNAseq | 0.2219 | 0.0169 | |
| SRP219564 | CCDC93 | 54520 | RNAseq | -0.2494 | 0.2350 | |
| TCGA | CCDC93 | 54520 | RNAseq | -0.0982 | 0.0592 |
Upregulated datasets: 2; Downregulated datasets: 1.
Survival by CCDC93 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CCDC93:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CCDC93 | 54520 | 4 | 1 | 25 | |
| GSE20123 | CCDC93 | 54520 | 4 | 1 | 25 | |
| GSE43470 | CCDC93 | 54520 | 3 | 1 | 39 | |
| GSE46452 | CCDC93 | 54520 | 1 | 4 | 54 | |
| GSE47630 | CCDC93 | 54520 | 6 | 0 | 34 | |
| GSE54993 | CCDC93 | 54520 | 0 | 6 | 64 | |
| GSE54994 | CCDC93 | 54520 | 11 | 0 | 42 | |
| GSE60625 | CCDC93 | 54520 | 0 | 3 | 8 | |
| GSE74703 | CCDC93 | 54520 | 3 | 1 | 32 | |
| GSE74704 | CCDC93 | 54520 | 2 | 1 | 17 | |
| TCGA | CCDC93 | 54520 | 31 | 6 | 59 |
Total number of gains: 65; Total number of losses: 24; Total Number of normals: 399.
Somatic mutations of CCDC93:
Generating mutation plots.
Highly correlated genes for CCDC93:
Showing top 20/1011 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CCDC93 | TNRC18 | 0.806349 | 3 | 0 | 3 |
| CCDC93 | JMY | 0.760692 | 3 | 0 | 3 |
| CCDC93 | PKIG | 0.750528 | 3 | 0 | 3 |
| CCDC93 | MRPS6 | 0.74652 | 4 | 0 | 4 |
| CCDC93 | TTI2 | 0.744065 | 3 | 0 | 3 |
| CCDC93 | ZNF830 | 0.740122 | 4 | 0 | 4 |
| CCDC93 | LRRC58 | 0.737313 | 4 | 0 | 4 |
| CCDC93 | CBFA2T2 | 0.734851 | 5 | 0 | 5 |
| CCDC93 | CHD6 | 0.734762 | 4 | 0 | 3 |
| CCDC93 | UBR3 | 0.732742 | 3 | 0 | 3 |
| CCDC93 | SIPA1L2 | 0.724402 | 4 | 0 | 4 |
| CCDC93 | DEXI | 0.714368 | 3 | 0 | 3 |
| CCDC93 | NTPCR | 0.711006 | 4 | 0 | 4 |
| CCDC93 | BRCA2 | 0.709199 | 4 | 0 | 3 |
| CCDC93 | GNA13 | 0.708625 | 4 | 0 | 3 |
| CCDC93 | ZFAND3 | 0.708616 | 3 | 0 | 3 |
| CCDC93 | METTL14 | 0.708041 | 3 | 0 | 3 |
| CCDC93 | EPM2AIP1 | 0.705819 | 3 | 0 | 3 |
| CCDC93 | ARID1B | 0.703586 | 3 | 0 | 3 |
| CCDC93 | BABAM1 | 0.702608 | 3 | 0 | 3 |
For details and further investigation, click here
