| Full name: trinucleotide repeat containing 18 | Alias Symbol: CAGL79|TNRC18A|KIAA1856 | ||
| Type: protein-coding gene | Cytoband: 7p22.1 | ||
| Entrez ID: 84629 | HGNC ID: HGNC:11962 | Ensembl Gene: ENSG00000182095 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of TNRC18:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TNRC18 | 84629 | 226691_at | 0.4164 | 0.3182 | |
| GSE26886 | TNRC18 | 84629 | 226691_at | 0.6425 | 0.0026 | |
| GSE45670 | TNRC18 | 84629 | 226691_at | 0.0210 | 0.9082 | |
| GSE53622 | TNRC18 | 84629 | 17977 | 0.3704 | 0.0000 | |
| GSE53624 | TNRC18 | 84629 | 17977 | 0.5195 | 0.0000 | |
| GSE63941 | TNRC18 | 84629 | 226691_at | 1.0671 | 0.0176 | |
| GSE77861 | TNRC18 | 84629 | 226691_at | 0.8676 | 0.0011 | |
| GSE97050 | TNRC18 | 84629 | A_33_P3321507 | 0.0927 | 0.6783 | |
| SRP007169 | TNRC18 | 84629 | RNAseq | 1.6862 | 0.0000 | |
| SRP008496 | TNRC18 | 84629 | RNAseq | 1.7172 | 0.0000 | |
| SRP064894 | TNRC18 | 84629 | RNAseq | 0.4463 | 0.0209 | |
| SRP133303 | TNRC18 | 84629 | RNAseq | 0.3001 | 0.0416 | |
| SRP159526 | TNRC18 | 84629 | RNAseq | 0.6764 | 0.0096 | |
| SRP193095 | TNRC18 | 84629 | RNAseq | 0.9777 | 0.0000 | |
| SRP219564 | TNRC18 | 84629 | RNAseq | 0.1816 | 0.5535 | |
| TCGA | TNRC18 | 84629 | RNAseq | 0.0274 | 0.4930 |
Upregulated datasets: 3; Downregulated datasets: 0.
Survival by TNRC18 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TNRC18:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TNRC18 | 84629 | 14 | 1 | 15 | |
| GSE20123 | TNRC18 | 84629 | 14 | 1 | 15 | |
| GSE43470 | TNRC18 | 84629 | 6 | 1 | 36 | |
| GSE46452 | TNRC18 | 84629 | 13 | 1 | 45 | |
| GSE47630 | TNRC18 | 84629 | 9 | 1 | 30 | |
| GSE54993 | TNRC18 | 84629 | 0 | 6 | 64 | |
| GSE54994 | TNRC18 | 84629 | 22 | 1 | 30 | |
| GSE60625 | TNRC18 | 84629 | 0 | 0 | 11 | |
| GSE74703 | TNRC18 | 84629 | 6 | 0 | 30 | |
| GSE74704 | TNRC18 | 84629 | 9 | 0 | 11 | |
| TCGA | TNRC18 | 84629 | 56 | 5 | 35 |
Total number of gains: 149; Total number of losses: 17; Total Number of normals: 322.
Somatic mutations of TNRC18:
Generating mutation plots.
Highly correlated genes for TNRC18:
Showing top 20/902 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TNRC18 | CCDC93 | 0.806349 | 3 | 0 | 3 |
| TNRC18 | WDR81 | 0.797055 | 3 | 0 | 3 |
| TNRC18 | KIF16B | 0.792706 | 3 | 0 | 3 |
| TNRC18 | CDKN1C | 0.786458 | 3 | 0 | 3 |
| TNRC18 | RAD23A | 0.769915 | 5 | 0 | 5 |
| TNRC18 | SLC39A3 | 0.763765 | 3 | 0 | 3 |
| TNRC18 | PIK3R3 | 0.76132 | 3 | 0 | 3 |
| TNRC18 | ZNF703 | 0.760563 | 3 | 0 | 3 |
| TNRC18 | RILPL1 | 0.760242 | 5 | 0 | 5 |
| TNRC18 | ALKBH6 | 0.756257 | 4 | 0 | 4 |
| TNRC18 | TIPRL | 0.754717 | 3 | 0 | 3 |
| TNRC18 | ZDHHC9 | 0.753661 | 3 | 0 | 3 |
| TNRC18 | RNMT | 0.74918 | 3 | 0 | 3 |
| TNRC18 | LTBR | 0.748103 | 3 | 0 | 3 |
| TNRC18 | TMEM230 | 0.74476 | 3 | 0 | 3 |
| TNRC18 | UBB | 0.743181 | 3 | 0 | 3 |
| TNRC18 | TMEM63B | 0.737975 | 3 | 0 | 3 |
| TNRC18 | SLC39A1 | 0.736498 | 4 | 0 | 3 |
| TNRC18 | PPP1R10 | 0.73233 | 3 | 0 | 3 |
| TNRC18 | ABL1 | 0.726531 | 4 | 0 | 3 |
For details and further investigation, click here
