CLDN11

 

Full name: claudin 11 Alias Symbol: OSP
Type: protein-coding gene Cytoband: 3q26.2
Entrez ID: 5010 HGNC ID: HGNC:8514 Ensembl Gene: ENSG00000013297 OMIM ID: 601326
Drug and gene relationship at DGIdb

 

CLDN11 involved pathways:

KEGG pathway Description View
hsa04530Tight junction

 

Expression of CLDN11:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CLDN11 5010 228335_at -2.3510 0.0559
GSE20347 CLDN11 5010 206908_s_at 0.0121 0.9182
GSE23400 CLDN11 5010 206908_s_at -0.2122 0.0000
GSE26886 CLDN11 5010 206908_s_at 0.2479 0.0865
GSE29001 CLDN11 5010 206908_s_at 0.0756 0.7171
GSE38129 CLDN11 5010 206908_s_at -0.1011 0.2177
GSE45670 CLDN11 5010 228335_at -2.4844 0.0000
GSE53622 CLDN11 5010 147584 -1.3918 0.0000
GSE53624 CLDN11 5010 147584 -1.6800 0.0000
GSE63941 CLDN11 5010 228335_at -6.4704 0.0008
GSE77861 CLDN11 5010 206908_s_at -0.1523 0.0787
GSE97050 CLDN11 5010 A_33_P3255404 0.0229 0.9340
SRP064894 CLDN11 5010 RNAseq -1.1970 0.0001
SRP133303 CLDN11 5010 RNAseq -1.5023 0.0000
SRP159526 CLDN11 5010 RNAseq -0.3514 0.5890
SRP193095 CLDN11 5010 RNAseq 0.5974 0.0190
SRP219564 CLDN11 5010 RNAseq -0.3954 0.5026
TCGA CLDN11 5010 RNAseq -0.5971 0.0407

Upregulated datasets: 0; Downregulated datasets: 6.  


 

Survival by CLDN11 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CLDN11:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CLDN11 5010 22 0 8
GSE20123 CLDN11 5010 22 0 8
GSE43470 CLDN11 5010 24 0 19
GSE46452 CLDN11 5010 19 1 39
GSE47630 CLDN11 5010 27 2 11
GSE54993 CLDN11 5010 1 14 55
GSE54994 CLDN11 5010 41 0 12
GSE60625 CLDN11 5010 0 6 5
GSE74703 CLDN11 5010 20 0 16
GSE74704 CLDN11 5010 14 0 6
TCGA CLDN11 5010 80 0 16

Total number of gains: 270; Total number of losses: 23; Total Number of normals: 195.  


 

Somatic mutations of CLDN11:

 

Generating mutation plots.

 

Highly correlated genes for CLDN11:

 

Showing top 20/813 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CLDN11LINC012790.814707303
CLDN11NR2F10.802724303
CLDN11LINC010820.775092505
CLDN11TMEM1000.77292505
CLDN11IL13RA20.738823303
CLDN11ASPA0.735983706
CLDN11RAPGEF10.734833404
CLDN11CXCL120.730967606
CLDN11GPRASP20.730735303
CLDN11ARSG0.727398303
CLDN11ARHGAP310.727387605
CLDN11FIBIN0.722527404
CLDN11XPC0.719582403
CLDN11GFRA10.71674807
CLDN11RERG0.712829505
CLDN11RERGL0.712666505
CLDN11CREB3L10.711996404
CLDN11EBF10.711211606
CLDN11CNRIP10.711151605
CLDN11CCDC30.710601504

For details and further investigation, click here