Full name: clock circadian regulator | Alias Symbol: KIAA0334|KAT13D|bHLHe8 | ||
Type: protein-coding gene | Cytoband: 4q12 | ||
Entrez ID: 9575 | HGNC ID: HGNC:2082 | Ensembl Gene: ENSG00000134852 | OMIM ID: 601851 |
Drug and gene relationship at DGIdb |
CLOCK involved pathways:
KEGG pathway | Description | View |
---|---|---|
hsa04710 | Circadian rhythm | |
hsa04728 | Dopaminergic synapse |
Expression of CLOCK:
Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
---|---|---|---|---|---|---|
GSE17351 | CLOCK | 9575 | 227531_at | -0.5077 | 0.1166 | |
GSE20347 | CLOCK | 9575 | 204980_at | -1.3180 | 0.0000 | |
GSE23400 | CLOCK | 9575 | 204980_at | -0.5355 | 0.0000 | |
GSE26886 | CLOCK | 9575 | 227531_at | -0.9728 | 0.0002 | |
GSE29001 | CLOCK | 9575 | 204980_at | -1.0905 | 0.0001 | |
GSE38129 | CLOCK | 9575 | 204980_at | -0.9822 | 0.0000 | |
GSE45670 | CLOCK | 9575 | 227531_at | -0.5494 | 0.0298 | |
GSE53622 | CLOCK | 9575 | 18016 | -0.8770 | 0.0000 | |
GSE53624 | CLOCK | 9575 | 18016 | -1.1495 | 0.0000 | |
GSE63941 | CLOCK | 9575 | 227531_at | -1.1745 | 0.0968 | |
GSE77861 | CLOCK | 9575 | 204980_at | -0.8376 | 0.0191 | |
GSE97050 | CLOCK | 9575 | A_23_P419038 | -0.4371 | 0.1235 | |
SRP007169 | CLOCK | 9575 | RNAseq | -0.6139 | 0.1966 | |
SRP008496 | CLOCK | 9575 | RNAseq | -0.4207 | 0.1314 | |
SRP064894 | CLOCK | 9575 | RNAseq | -0.6986 | 0.0005 | |
SRP133303 | CLOCK | 9575 | RNAseq | -0.5179 | 0.0005 | |
SRP159526 | CLOCK | 9575 | RNAseq | -1.4387 | 0.0000 | |
SRP193095 | CLOCK | 9575 | RNAseq | -0.8327 | 0.0000 | |
SRP219564 | CLOCK | 9575 | RNAseq | -0.9643 | 0.0012 | |
TCGA | CLOCK | 9575 | RNAseq | -0.2586 | 0.0002 |
Upregulated datasets: 0; Downregulated datasets: 4.
Survival by CLOCK expression:
Note: Click image to view full size file.
Copy number change of CLOCK:
Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
---|---|---|---|---|---|---|
GSE15526 | CLOCK | 9575 | 3 | 11 | 16 | |
GSE20123 | CLOCK | 9575 | 2 | 11 | 17 | |
GSE43470 | CLOCK | 9575 | 0 | 14 | 29 | |
GSE46452 | CLOCK | 9575 | 1 | 36 | 22 | |
GSE47630 | CLOCK | 9575 | 1 | 18 | 21 | |
GSE54993 | CLOCK | 9575 | 7 | 0 | 63 | |
GSE54994 | CLOCK | 9575 | 2 | 10 | 41 | |
GSE60625 | CLOCK | 9575 | 0 | 0 | 11 | |
GSE74703 | CLOCK | 9575 | 0 | 12 | 24 | |
GSE74704 | CLOCK | 9575 | 1 | 6 | 13 | |
TCGA | CLOCK | 9575 | 20 | 27 | 49 |
Total number of gains: 37; Total number of losses: 145; Total Number of normals: 306.
Somatic mutations of CLOCK:
Generating mutation plots.
Highly correlated genes for CLOCK:
Showing top 20/1506 corelated genes with mean PCC>0.5.
Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
---|---|---|---|---|---|
CLOCK | C5orf51 | 0.771841 | 3 | 0 | 3 |
CLOCK | GDPD1 | 0.76017 | 3 | 0 | 3 |
CLOCK | FAM98C | 0.748477 | 4 | 0 | 4 |
CLOCK | MGST2 | 0.747449 | 11 | 0 | 11 |
CLOCK | GPD1L | 0.744404 | 11 | 0 | 11 |
CLOCK | NFIA | 0.739854 | 7 | 0 | 7 |
CLOCK | CA13 | 0.739413 | 3 | 0 | 3 |
CLOCK | ARHGEF10L | 0.73912 | 11 | 0 | 10 |
CLOCK | C12orf29 | 0.738797 | 10 | 0 | 9 |
CLOCK | SHROOM3 | 0.734975 | 7 | 0 | 6 |
CLOCK | SORT1 | 0.734458 | 11 | 0 | 10 |
CLOCK | PAQR8 | 0.733994 | 7 | 0 | 7 |
CLOCK | USP54 | 0.733675 | 7 | 0 | 6 |
CLOCK | EXPH5 | 0.727497 | 10 | 0 | 10 |
CLOCK | LNX1 | 0.727483 | 7 | 0 | 7 |
CLOCK | ECHDC2 | 0.726759 | 11 | 0 | 11 |
CLOCK | CGNL1 | 0.726678 | 7 | 0 | 6 |
CLOCK | KIAA0232 | 0.723698 | 11 | 0 | 10 |
CLOCK | UBL3 | 0.72288 | 10 | 0 | 10 |
CLOCK | CASC3 | 0.721382 | 3 | 0 | 3 |
For details and further investigation, click here