CLOCK

 

Full name: clock circadian regulator Alias Symbol: KIAA0334|KAT13D|bHLHe8
Type: protein-coding gene Cytoband: 4q12
Entrez ID: 9575 HGNC ID: HGNC:2082 Ensembl Gene: ENSG00000134852 OMIM ID: 601851
Drug and gene relationship at DGIdb

 

CLOCK involved pathways:

KEGG pathway Description View
hsa04710Circadian rhythm
hsa04728Dopaminergic synapse

 

Expression of CLOCK:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CLOCK 9575 227531_at -0.5077 0.1166
GSE20347 CLOCK 9575 204980_at -1.3180 0.0000
GSE23400 CLOCK 9575 204980_at -0.5355 0.0000
GSE26886 CLOCK 9575 227531_at -0.9728 0.0002
GSE29001 CLOCK 9575 204980_at -1.0905 0.0001
GSE38129 CLOCK 9575 204980_at -0.9822 0.0000
GSE45670 CLOCK 9575 227531_at -0.5494 0.0298
GSE53622 CLOCK 9575 18016 -0.8770 0.0000
GSE53624 CLOCK 9575 18016 -1.1495 0.0000
GSE63941 CLOCK 9575 227531_at -1.1745 0.0968
GSE77861 CLOCK 9575 204980_at -0.8376 0.0191
GSE97050 CLOCK 9575 A_23_P419038 -0.4371 0.1235
SRP007169 CLOCK 9575 RNAseq -0.6139 0.1966
SRP008496 CLOCK 9575 RNAseq -0.4207 0.1314
SRP064894 CLOCK 9575 RNAseq -0.6986 0.0005
SRP133303 CLOCK 9575 RNAseq -0.5179 0.0005
SRP159526 CLOCK 9575 RNAseq -1.4387 0.0000
SRP193095 CLOCK 9575 RNAseq -0.8327 0.0000
SRP219564 CLOCK 9575 RNAseq -0.9643 0.0012
TCGA CLOCK 9575 RNAseq -0.2586 0.0002

Upregulated datasets: 0; Downregulated datasets: 4.  


 

Survival by CLOCK expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CLOCK:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CLOCK 9575 3 11 16
GSE20123 CLOCK 9575 2 11 17
GSE43470 CLOCK 9575 0 14 29
GSE46452 CLOCK 9575 1 36 22
GSE47630 CLOCK 9575 1 18 21
GSE54993 CLOCK 9575 7 0 63
GSE54994 CLOCK 9575 2 10 41
GSE60625 CLOCK 9575 0 0 11
GSE74703 CLOCK 9575 0 12 24
GSE74704 CLOCK 9575 1 6 13
TCGA CLOCK 9575 20 27 49

Total number of gains: 37; Total number of losses: 145; Total Number of normals: 306.  


 

Somatic mutations of CLOCK:

 

Generating mutation plots.

 

Highly correlated genes for CLOCK:

 

Showing top 20/1506 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CLOCKC5orf510.771841303
CLOCKGDPD10.76017303
CLOCKFAM98C0.748477404
CLOCKMGST20.74744911011
CLOCKGPD1L0.74440411011
CLOCKNFIA0.739854707
CLOCKCA130.739413303
CLOCKARHGEF10L0.7391211010
CLOCKC12orf290.7387971009
CLOCKSHROOM30.734975706
CLOCKSORT10.73445811010
CLOCKPAQR80.733994707
CLOCKUSP540.733675706
CLOCKEXPH50.72749710010
CLOCKLNX10.727483707
CLOCKECHDC20.72675911011
CLOCKCGNL10.726678706
CLOCKKIAA02320.72369811010
CLOCKUBL30.7228810010
CLOCKCASC30.721382303

For details and further investigation, click here