| Full name: calsyntenin 1 | Alias Symbol: CSTN1|KIAA0911|CDHR12 | ||
| Type: protein-coding gene | Cytoband: 1p36.22 | ||
| Entrez ID: 22883 | HGNC ID: HGNC:17447 | Ensembl Gene: ENSG00000171603 | OMIM ID: 611321 |
| Drug and gene relationship at DGIdb | |||
Expression of CLSTN1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CLSTN1 | 22883 | 201561_s_at | 0.6697 | 0.0423 | |
| GSE20347 | CLSTN1 | 22883 | 201561_s_at | 0.5623 | 0.0003 | |
| GSE23400 | CLSTN1 | 22883 | 201561_s_at | 0.7312 | 0.0000 | |
| GSE26886 | CLSTN1 | 22883 | 201561_s_at | 0.9377 | 0.0002 | |
| GSE29001 | CLSTN1 | 22883 | 201561_s_at | 0.6155 | 0.0044 | |
| GSE38129 | CLSTN1 | 22883 | 201561_s_at | 0.6157 | 0.0000 | |
| GSE45670 | CLSTN1 | 22883 | 201561_s_at | 0.5747 | 0.0022 | |
| GSE53622 | CLSTN1 | 22883 | 15951 | 0.7238 | 0.0000 | |
| GSE53624 | CLSTN1 | 22883 | 15951 | 0.7903 | 0.0000 | |
| GSE63941 | CLSTN1 | 22883 | 201561_s_at | -0.0149 | 0.9819 | |
| GSE77861 | CLSTN1 | 22883 | 201561_s_at | 0.4669 | 0.1646 | |
| GSE97050 | CLSTN1 | 22883 | A_24_P191067 | 0.5529 | 0.1666 | |
| SRP007169 | CLSTN1 | 22883 | RNAseq | 1.4273 | 0.0100 | |
| SRP008496 | CLSTN1 | 22883 | RNAseq | 1.1070 | 0.0008 | |
| SRP064894 | CLSTN1 | 22883 | RNAseq | 1.1430 | 0.0000 | |
| SRP133303 | CLSTN1 | 22883 | RNAseq | 0.9591 | 0.0000 | |
| SRP159526 | CLSTN1 | 22883 | RNAseq | 0.9681 | 0.0012 | |
| SRP193095 | CLSTN1 | 22883 | RNAseq | 1.1067 | 0.0000 | |
| SRP219564 | CLSTN1 | 22883 | RNAseq | 0.5217 | 0.2195 | |
| TCGA | CLSTN1 | 22883 | RNAseq | 0.2494 | 0.0000 |
Upregulated datasets: 4; Downregulated datasets: 0.
Survival by CLSTN1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CLSTN1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CLSTN1 | 22883 | 1 | 5 | 24 | |
| GSE20123 | CLSTN1 | 22883 | 1 | 3 | 26 | |
| GSE43470 | CLSTN1 | 22883 | 6 | 5 | 32 | |
| GSE46452 | CLSTN1 | 22883 | 7 | 1 | 51 | |
| GSE47630 | CLSTN1 | 22883 | 8 | 4 | 28 | |
| GSE54993 | CLSTN1 | 22883 | 3 | 1 | 66 | |
| GSE54994 | CLSTN1 | 22883 | 12 | 4 | 37 | |
| GSE60625 | CLSTN1 | 22883 | 0 | 0 | 11 | |
| GSE74703 | CLSTN1 | 22883 | 5 | 3 | 28 | |
| GSE74704 | CLSTN1 | 22883 | 1 | 0 | 19 | |
| TCGA | CLSTN1 | 22883 | 9 | 25 | 62 |
Total number of gains: 53; Total number of losses: 51; Total Number of normals: 384.
Somatic mutations of CLSTN1:
Generating mutation plots.
Highly correlated genes for CLSTN1:
Showing top 20/1683 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CLSTN1 | WDR81 | 0.823686 | 3 | 0 | 3 |
| CLSTN1 | SLC26A11 | 0.795936 | 3 | 0 | 3 |
| CLSTN1 | ITGB8 | 0.767081 | 3 | 0 | 3 |
| CLSTN1 | DPP7 | 0.756339 | 3 | 0 | 3 |
| CLSTN1 | PIGU | 0.753813 | 3 | 0 | 3 |
| CLSTN1 | RILPL1 | 0.737093 | 3 | 0 | 3 |
| CLSTN1 | ST6GAL1 | 0.735708 | 3 | 0 | 3 |
| CLSTN1 | RNF130 | 0.735275 | 3 | 0 | 3 |
| CLSTN1 | OAF | 0.726401 | 3 | 0 | 3 |
| CLSTN1 | NADSYN1 | 0.725834 | 3 | 0 | 3 |
| CLSTN1 | NAV1 | 0.722466 | 5 | 0 | 4 |
| CLSTN1 | TMEM44 | 0.721953 | 4 | 0 | 4 |
| CLSTN1 | SEC22C | 0.721387 | 3 | 0 | 3 |
| CLSTN1 | PARVB | 0.713614 | 3 | 0 | 3 |
| CLSTN1 | ITGB4 | 0.711881 | 12 | 0 | 12 |
| CLSTN1 | PPP1R9B | 0.711737 | 4 | 0 | 4 |
| CLSTN1 | R3HDM2 | 0.711717 | 3 | 0 | 3 |
| CLSTN1 | SPON2 | 0.711018 | 3 | 0 | 3 |
| CLSTN1 | ZBTB9 | 0.708269 | 5 | 0 | 5 |
| CLSTN1 | SGTB | 0.707121 | 3 | 0 | 3 |
For details and further investigation, click here
