| Full name: contactin 5 | Alias Symbol: NB-2|hNB-2 | ||
| Type: protein-coding gene | Cytoband: 11q22.1 | ||
| Entrez ID: 53942 | HGNC ID: HGNC:2175 | Ensembl Gene: ENSG00000149972 | OMIM ID: 607219 |
| Drug and gene relationship at DGIdb | |||
Expression of CNTN5:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CNTN5 | 53942 | 207452_s_at | 0.1569 | 0.5205 | |
| GSE20347 | CNTN5 | 53942 | 207452_s_at | 0.0897 | 0.4208 | |
| GSE23400 | CNTN5 | 53942 | 207452_s_at | 0.0337 | 0.3038 | |
| GSE26886 | CNTN5 | 53942 | 207452_s_at | 0.0064 | 0.9609 | |
| GSE29001 | CNTN5 | 53942 | 207452_s_at | -0.0236 | 0.8876 | |
| GSE38129 | CNTN5 | 53942 | 207452_s_at | 0.0693 | 0.3675 | |
| GSE45670 | CNTN5 | 53942 | 207452_s_at | 0.1366 | 0.1207 | |
| GSE53622 | CNTN5 | 53942 | 74007 | 1.6197 | 0.0000 | |
| GSE53624 | CNTN5 | 53942 | 74007 | 1.8429 | 0.0000 | |
| GSE63941 | CNTN5 | 53942 | 207452_s_at | -0.1130 | 0.5175 | |
| GSE77861 | CNTN5 | 53942 | 207452_s_at | -0.0385 | 0.6511 | |
| SRP159526 | CNTN5 | 53942 | RNAseq | 5.5357 | 0.0000 | |
| TCGA | CNTN5 | 53942 | RNAseq | 3.0532 | 0.0000 |
Upregulated datasets: 4; Downregulated datasets: 0.
Survival by CNTN5 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CNTN5:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CNTN5 | 53942 | 3 | 10 | 17 | |
| GSE20123 | CNTN5 | 53942 | 3 | 10 | 17 | |
| GSE43470 | CNTN5 | 53942 | 5 | 5 | 33 | |
| GSE46452 | CNTN5 | 53942 | 5 | 24 | 30 | |
| GSE47630 | CNTN5 | 53942 | 2 | 19 | 19 | |
| GSE54993 | CNTN5 | 53942 | 8 | 3 | 59 | |
| GSE54994 | CNTN5 | 53942 | 7 | 18 | 28 | |
| GSE60625 | CNTN5 | 53942 | 0 | 3 | 8 | |
| GSE74703 | CNTN5 | 53942 | 3 | 4 | 29 | |
| GSE74704 | CNTN5 | 53942 | 3 | 6 | 11 | |
| TCGA | CNTN5 | 53942 | 13 | 44 | 39 |
Total number of gains: 52; Total number of losses: 146; Total Number of normals: 290.
Somatic mutations of CNTN5:
Generating mutation plots.
Highly correlated genes for CNTN5:
Showing all 19 correlated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CNTN5 | COA4 | 0.695533 | 3 | 0 | 3 |
| CNTN5 | MMP27 | 0.630616 | 4 | 0 | 3 |
| CNTN5 | LINGO2 | 0.628193 | 3 | 0 | 3 |
| CNTN5 | SAGE1 | 0.594224 | 4 | 0 | 3 |
| CNTN5 | ACTL7A | 0.58875 | 3 | 0 | 3 |
| CNTN5 | MYH8 | 0.584478 | 5 | 0 | 3 |
| CNTN5 | CDSN | 0.57198 | 4 | 0 | 3 |
| CNTN5 | POLR1E | 0.559748 | 3 | 0 | 3 |
| CNTN5 | ARHGEF38 | 0.556791 | 3 | 0 | 3 |
| CNTN5 | DIAPH2-AS1 | 0.556281 | 3 | 0 | 3 |
| CNTN5 | WDR86 | 0.556121 | 4 | 0 | 3 |
| CNTN5 | MMP3 | 0.551953 | 4 | 0 | 3 |
| CNTN5 | MYH2 | 0.551036 | 4 | 0 | 3 |
| CNTN5 | CD244 | 0.54861 | 4 | 0 | 3 |
| CNTN5 | GNG3 | 0.544328 | 3 | 0 | 3 |
| CNTN5 | SLC22A24 | 0.540074 | 3 | 0 | 3 |
| CNTN5 | TFDP3 | 0.525225 | 5 | 0 | 3 |
| CNTN5 | IQSEC3 | 0.514883 | 4 | 0 | 3 |
| CNTN5 | VGLL1 | 0.513327 | 4 | 0 | 3 |
For details and further investigation, click here
