COMMD8

 

Full name: COMM domain containing 8 Alias Symbol: FLJ20502
Type: protein-coding gene Cytoband: 4p12
Entrez ID: 54951 HGNC ID: HGNC:26036 Ensembl Gene: ENSG00000169019 OMIM ID: 616656
Drug and gene relationship at DGIdb

 

Expression of COMMD8:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 COMMD8 54951 218351_at -0.4297 0.3993
GSE20347 COMMD8 54951 218351_at -0.8165 0.0000
GSE23400 COMMD8 54951 218351_at -0.1221 0.1175
GSE26886 COMMD8 54951 218351_at -1.2014 0.0001
GSE29001 COMMD8 54951 218351_at -0.2962 0.5454
GSE38129 COMMD8 54951 218351_at -0.4236 0.0063
GSE45670 COMMD8 54951 218351_at -0.1350 0.4287
GSE53622 COMMD8 54951 33228 -0.3096 0.0001
GSE53624 COMMD8 54951 169744 -0.5187 0.0000
GSE63941 COMMD8 54951 218351_at -0.2653 0.4971
GSE77861 COMMD8 54951 218351_at -0.9407 0.0032
GSE97050 COMMD8 54951 A_33_P3285077 0.1509 0.6594
SRP007169 COMMD8 54951 RNAseq -0.8607 0.0684
SRP008496 COMMD8 54951 RNAseq -0.7592 0.0085
SRP064894 COMMD8 54951 RNAseq -0.2893 0.1318
SRP133303 COMMD8 54951 RNAseq 0.1539 0.4976
SRP159526 COMMD8 54951 RNAseq -0.7913 0.0092
SRP193095 COMMD8 54951 RNAseq -1.1009 0.0000
SRP219564 COMMD8 54951 RNAseq -0.7852 0.0539
TCGA COMMD8 54951 RNAseq 0.1819 0.0066

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by COMMD8 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of COMMD8:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 COMMD8 54951 1 15 14
GSE20123 COMMD8 54951 1 15 14
GSE43470 COMMD8 54951 0 13 30
GSE46452 COMMD8 54951 1 37 21
GSE47630 COMMD8 54951 1 18 21
GSE54993 COMMD8 54951 7 0 63
GSE54994 COMMD8 54951 4 9 40
GSE60625 COMMD8 54951 0 0 11
GSE74703 COMMD8 54951 0 11 25
GSE74704 COMMD8 54951 0 9 11
TCGA COMMD8 54951 16 33 47

Total number of gains: 31; Total number of losses: 160; Total Number of normals: 297.  


 

Somatic mutations of COMMD8:

 

Generating mutation plots.

 

Highly correlated genes for COMMD8:

 

Showing top 20/1423 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
COMMD8SLC12A60.784395303
COMMD8ALG130.770108404
COMMD8NANS0.751203303
COMMD8IPMK0.750623404
COMMD8KLHDC20.750354303
COMMD8ATG2B0.741699303
COMMD8DDX520.738699303
COMMD8FYTTD10.731891303
COMMD8RALGPS20.723184504
COMMD8FAHD10.722611404
COMMD8KIF21A0.718749404
COMMD8SH3PXD2A-AS10.716138303
COMMD8EMCN0.707407303
COMMD8SLC22A150.70538504
COMMD8SLC35A50.704126403
COMMD8GAPT0.703644303
COMMD8C2CD20.702133303
COMMD8ORMDL20.701277706
COMMD8FBXL30.70025403
COMMD8TMEM167A0.700112403

For details and further investigation, click here