| Full name: SH3PXD2A antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 10q24.33 | ||
| Entrez ID: 100505839 | HGNC ID: HGNC:45242 | Ensembl Gene: ENSG00000280693 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of SH3PXD2A-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SH3PXD2A-AS1 | 100505839 | 1557389_at | -1.6945 | 0.0900 | |
| GSE26886 | SH3PXD2A-AS1 | 100505839 | 1557389_at | -2.2876 | 0.0000 | |
| GSE45670 | SH3PXD2A-AS1 | 100505839 | 1557389_at | -0.4148 | 0.2844 | |
| GSE63941 | SH3PXD2A-AS1 | 100505839 | 1557389_at | 0.8186 | 0.3331 | |
| GSE77861 | SH3PXD2A-AS1 | 100505839 | 1557389_at | -1.1551 | 0.0138 | |
| SRP007169 | SH3PXD2A-AS1 | 100505839 | RNAseq | -2.4324 | 0.0012 | |
| SRP008496 | SH3PXD2A-AS1 | 100505839 | RNAseq | -2.2663 | 0.0000 | |
| SRP064894 | SH3PXD2A-AS1 | 100505839 | RNAseq | -1.7555 | 0.0000 | |
| SRP133303 | SH3PXD2A-AS1 | 100505839 | RNAseq | -1.0248 | 0.0001 | |
| SRP159526 | SH3PXD2A-AS1 | 100505839 | RNAseq | -2.2289 | 0.0004 | |
| SRP193095 | SH3PXD2A-AS1 | 100505839 | RNAseq | -1.2531 | 0.0001 | |
| SRP219564 | SH3PXD2A-AS1 | 100505839 | RNAseq | -2.8776 | 0.0064 |
Upregulated datasets: 0; Downregulated datasets: 9.
Copy number change of SH3PXD2A-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SH3PXD2A-AS1 | 100505839 | 1 | 9 | 20 | |
| GSE20123 | SH3PXD2A-AS1 | 100505839 | 1 | 8 | 21 | |
| GSE43470 | SH3PXD2A-AS1 | 100505839 | 2 | 8 | 33 | |
| GSE46452 | SH3PXD2A-AS1 | 100505839 | 0 | 11 | 48 | |
| GSE47630 | SH3PXD2A-AS1 | 100505839 | 2 | 14 | 24 | |
| GSE54993 | SH3PXD2A-AS1 | 100505839 | 8 | 0 | 62 | |
| GSE54994 | SH3PXD2A-AS1 | 100505839 | 1 | 10 | 42 | |
| GSE60625 | SH3PXD2A-AS1 | 100505839 | 0 | 0 | 11 | |
| GSE74703 | SH3PXD2A-AS1 | 100505839 | 1 | 5 | 30 | |
| GSE74704 | SH3PXD2A-AS1 | 100505839 | 0 | 4 | 16 |
Total number of gains: 16; Total number of losses: 69; Total Number of normals: 307.
Somatic mutations of SH3PXD2A-AS1:
Generating mutation plots.
Highly correlated genes for SH3PXD2A-AS1:
Showing top 20/834 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SH3PXD2A-AS1 | SCEL | 0.843934 | 4 | 0 | 4 |
| SH3PXD2A-AS1 | CHIC2 | 0.833664 | 3 | 0 | 3 |
| SH3PXD2A-AS1 | SLC39A2 | 0.827574 | 3 | 0 | 3 |
| SH3PXD2A-AS1 | PRSS3 | 0.825013 | 4 | 0 | 4 |
| SH3PXD2A-AS1 | PRSS2 | 0.822745 | 4 | 0 | 4 |
| SH3PXD2A-AS1 | TMEM45B | 0.8221 | 4 | 0 | 4 |
| SH3PXD2A-AS1 | EMP1 | 0.819794 | 4 | 0 | 4 |
| SH3PXD2A-AS1 | INO80C | 0.817278 | 4 | 0 | 4 |
| SH3PXD2A-AS1 | CYSRT1 | 0.815945 | 4 | 0 | 4 |
| SH3PXD2A-AS1 | EXOC1 | 0.81271 | 3 | 0 | 3 |
| SH3PXD2A-AS1 | TTC22 | 0.812357 | 4 | 0 | 4 |
| SH3PXD2A-AS1 | SERPINB1 | 0.810134 | 4 | 0 | 4 |
| SH3PXD2A-AS1 | CNFN | 0.809681 | 4 | 0 | 4 |
| SH3PXD2A-AS1 | ANXA9 | 0.808845 | 4 | 0 | 4 |
| SH3PXD2A-AS1 | FAM3D | 0.806782 | 4 | 0 | 4 |
| SH3PXD2A-AS1 | CEACAM7 | 0.80654 | 4 | 0 | 4 |
| SH3PXD2A-AS1 | MCEE | 0.805152 | 4 | 0 | 4 |
| SH3PXD2A-AS1 | C15orf48 | 0.804438 | 4 | 0 | 4 |
| SH3PXD2A-AS1 | CEACAM5 | 0.803824 | 4 | 0 | 4 |
| SH3PXD2A-AS1 | CPPED1 | 0.802856 | 4 | 0 | 4 |
For details and further investigation, click here
