CRMP1

 

Full name: collapsin response mediator protein 1 Alias Symbol: DRP-1|DPYSL1
Type: protein-coding gene Cytoband: 4p16.2
Entrez ID: 1400 HGNC ID: HGNC:2365 Ensembl Gene: ENSG00000072832 OMIM ID: 602462
Drug and gene relationship at DGIdb

 

Expression of CRMP1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CRMP1 1400 202517_at 0.0732 0.9356
GSE20347 CRMP1 1400 202517_at 0.2515 0.0775
GSE23400 CRMP1 1400 202517_at 0.1079 0.0604
GSE26886 CRMP1 1400 202517_at 0.4345 0.0557
GSE29001 CRMP1 1400 202517_at -0.0318 0.9105
GSE38129 CRMP1 1400 202517_at 0.3748 0.0314
GSE45670 CRMP1 1400 202517_at 0.2184 0.3677
GSE53622 CRMP1 1400 87186 0.5359 0.0000
GSE53624 CRMP1 1400 87186 0.6866 0.0000
GSE63941 CRMP1 1400 202517_at 0.8421 0.2920
GSE77861 CRMP1 1400 202517_at 0.3968 0.0791
GSE97050 CRMP1 1400 A_23_P132889 -0.1242 0.7013
SRP007169 CRMP1 1400 RNAseq 3.1776 0.0005
SRP008496 CRMP1 1400 RNAseq 3.4407 0.0000
SRP064894 CRMP1 1400 RNAseq 0.8595 0.0009
SRP133303 CRMP1 1400 RNAseq 0.6629 0.0112
SRP159526 CRMP1 1400 RNAseq 0.9097 0.0105
SRP193095 CRMP1 1400 RNAseq 0.6286 0.0013
SRP219564 CRMP1 1400 RNAseq 0.3011 0.5053
TCGA CRMP1 1400 RNAseq 0.0866 0.6312

Upregulated datasets: 2; Downregulated datasets: 0.  


 

Survival by CRMP1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CRMP1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CRMP1 1400 0 18 12
GSE20123 CRMP1 1400 0 18 12
GSE43470 CRMP1 1400 0 17 26
GSE46452 CRMP1 1400 1 36 22
GSE47630 CRMP1 1400 1 19 20
GSE54993 CRMP1 1400 10 0 60
GSE54994 CRMP1 1400 3 12 38
GSE60625 CRMP1 1400 0 0 11
GSE74703 CRMP1 1400 0 13 23
GSE74704 CRMP1 1400 0 10 10
TCGA CRMP1 1400 7 48 41

Total number of gains: 22; Total number of losses: 191; Total Number of normals: 275.  


 

Somatic mutations of CRMP1:

 

Generating mutation plots.

 

Highly correlated genes for CRMP1:

 

Showing top 20/296 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CRMP1ANKRD34A0.74055303
CRMP1ITGB30.72188303
CRMP1ZCCHC30.719653303
CRMP1KRTAP12-20.716843303
CRMP1MMP20.715059303
CRMP1CBL0.708087303
CRMP1MAPK8IP30.696954303
CRMP1ELP20.694685303
CRMP1RNF2140.692335303
CRMP1MPG0.688731404
CRMP1MYH100.687137303
CRMP1ENTPD20.6836303
CRMP1TUBB4B0.678663303
CRMP1LRRC550.668207403
CRMP1PCBP30.666619404
CRMP1PHLDB10.658755303
CRMP1HAUS10.657106303
CRMP1RIMKLA0.656341303
CRMP1PCDH190.654703505
CRMP1PRKACA0.652426303

For details and further investigation, click here