| Full name: leucine rich repeat containing 55 | Alias Symbol: FLJ45686 | ||
| Type: protein-coding gene | Cytoband: 11q12.1 | ||
| Entrez ID: 219527 | HGNC ID: HGNC:32324 | Ensembl Gene: ENSG00000183908 | OMIM ID: 615213 |
| Drug and gene relationship at DGIdb | |||
Expression of LRRC55:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LRRC55 | 219527 | 232856_at | -0.0779 | 0.8268 | |
| GSE26886 | LRRC55 | 219527 | 232856_at | 0.0413 | 0.6460 | |
| GSE45670 | LRRC55 | 219527 | 232856_at | 0.0439 | 0.6154 | |
| GSE53622 | LRRC55 | 219527 | 53999 | 0.6414 | 0.0001 | |
| GSE53624 | LRRC55 | 219527 | 53999 | 0.7248 | 0.0000 | |
| GSE63941 | LRRC55 | 219527 | 232856_at | 0.0670 | 0.6866 | |
| GSE77861 | LRRC55 | 219527 | 232856_at | -0.0471 | 0.6342 | |
| GSE97050 | LRRC55 | 219527 | A_33_P3210735 | -0.2576 | 0.3042 | |
| SRP133303 | LRRC55 | 219527 | RNAseq | 0.3948 | 0.2659 | |
| TCGA | LRRC55 | 219527 | RNAseq | 0.1216 | 0.8135 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LRRC55 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of LRRC55:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LRRC55 | 219527 | 1 | 4 | 25 | |
| GSE20123 | LRRC55 | 219527 | 1 | 4 | 25 | |
| GSE43470 | LRRC55 | 219527 | 1 | 5 | 37 | |
| GSE46452 | LRRC55 | 219527 | 9 | 4 | 46 | |
| GSE47630 | LRRC55 | 219527 | 3 | 9 | 28 | |
| GSE54993 | LRRC55 | 219527 | 3 | 0 | 67 | |
| GSE54994 | LRRC55 | 219527 | 5 | 6 | 42 | |
| GSE60625 | LRRC55 | 219527 | 0 | 3 | 8 | |
| GSE74703 | LRRC55 | 219527 | 1 | 3 | 32 | |
| GSE74704 | LRRC55 | 219527 | 1 | 4 | 15 | |
| TCGA | LRRC55 | 219527 | 14 | 10 | 72 |
Total number of gains: 39; Total number of losses: 52; Total Number of normals: 397.
Somatic mutations of LRRC55:
Generating mutation plots.
Highly correlated genes for LRRC55:
Showing top 20/53 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LRRC55 | YPEL2 | 0.765652 | 3 | 0 | 3 |
| LRRC55 | OCM2 | 0.762539 | 3 | 0 | 3 |
| LRRC55 | ORMDL3 | 0.747351 | 3 | 0 | 3 |
| LRRC55 | ARL2BP | 0.745633 | 3 | 0 | 3 |
| LRRC55 | MLYCD | 0.734031 | 3 | 0 | 3 |
| LRRC55 | SLC4A5 | 0.729056 | 3 | 0 | 3 |
| LRRC55 | ICAM5 | 0.725189 | 3 | 0 | 3 |
| LRRC55 | C9orf72 | 0.723926 | 3 | 0 | 3 |
| LRRC55 | SNF8 | 0.713857 | 3 | 0 | 3 |
| LRRC55 | MATN4 | 0.706226 | 3 | 0 | 3 |
| LRRC55 | GGT5 | 0.702995 | 3 | 0 | 3 |
| LRRC55 | C22orf31 | 0.686129 | 3 | 0 | 3 |
| LRRC55 | ALPK3 | 0.682614 | 3 | 0 | 3 |
| LRRC55 | EIF4ENIF1 | 0.67847 | 3 | 0 | 3 |
| LRRC55 | C12orf57 | 0.677877 | 3 | 0 | 3 |
| LRRC55 | SATB1 | 0.676518 | 3 | 0 | 3 |
| LRRC55 | KCNC4 | 0.676122 | 4 | 0 | 3 |
| LRRC55 | CRMP1 | 0.668207 | 4 | 0 | 3 |
| LRRC55 | PTGER3 | 0.661698 | 3 | 0 | 3 |
| LRRC55 | ZNF671 | 0.654589 | 3 | 0 | 3 |
For details and further investigation, click here
