| Full name: ribosomal modification protein rimK like family member A | Alias Symbol: MGC47816|RP11-157D18.1|NAAGS-II | ||
| Type: protein-coding gene | Cytoband: 1p34.2 | ||
| Entrez ID: 284716 | HGNC ID: HGNC:28725 | Ensembl Gene: ENSG00000177181 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of RIMKLA:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RIMKLA | 284716 | 235948_at | 0.1564 | 0.7109 | |
| GSE26886 | RIMKLA | 284716 | 235948_at | 0.5052 | 0.0048 | |
| GSE45670 | RIMKLA | 284716 | 235948_at | 0.0970 | 0.5873 | |
| GSE53622 | RIMKLA | 284716 | 7849 | 0.2514 | 0.3965 | |
| GSE53624 | RIMKLA | 284716 | 7849 | 0.2923 | 0.1650 | |
| GSE63941 | RIMKLA | 284716 | 235948_at | 0.8249 | 0.1461 | |
| GSE77861 | RIMKLA | 284716 | 235948_at | 0.1344 | 0.3899 | |
| GSE97050 | RIMKLA | 284716 | A_23_P349406 | -0.4257 | 0.5101 | |
| SRP064894 | RIMKLA | 284716 | RNAseq | 0.4218 | 0.2263 | |
| SRP133303 | RIMKLA | 284716 | RNAseq | 0.3326 | 0.3289 | |
| SRP159526 | RIMKLA | 284716 | RNAseq | 1.9713 | 0.0002 | |
| SRP193095 | RIMKLA | 284716 | RNAseq | 0.1937 | 0.4840 | |
| SRP219564 | RIMKLA | 284716 | RNAseq | -0.5437 | 0.5786 | |
| TCGA | RIMKLA | 284716 | RNAseq | -1.0164 | 0.0053 |
Upregulated datasets: 1; Downregulated datasets: 1.
Survival by RIMKLA expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of RIMKLA:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RIMKLA | 284716 | 4 | 3 | 23 | |
| GSE20123 | RIMKLA | 284716 | 3 | 2 | 25 | |
| GSE43470 | RIMKLA | 284716 | 7 | 2 | 34 | |
| GSE46452 | RIMKLA | 284716 | 3 | 1 | 55 | |
| GSE47630 | RIMKLA | 284716 | 9 | 2 | 29 | |
| GSE54993 | RIMKLA | 284716 | 0 | 2 | 68 | |
| GSE54994 | RIMKLA | 284716 | 13 | 2 | 38 | |
| GSE60625 | RIMKLA | 284716 | 0 | 0 | 11 | |
| GSE74703 | RIMKLA | 284716 | 6 | 1 | 29 | |
| GSE74704 | RIMKLA | 284716 | 1 | 0 | 19 | |
| TCGA | RIMKLA | 284716 | 13 | 16 | 67 |
Total number of gains: 59; Total number of losses: 31; Total Number of normals: 398.
Somatic mutations of RIMKLA:
Generating mutation plots.
Highly correlated genes for RIMKLA:
Showing top 20/185 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RIMKLA | CDKN2D | 0.762834 | 3 | 0 | 3 |
| RIMKLA | BCL7B | 0.7628 | 3 | 0 | 3 |
| RIMKLA | CDK5RAP2 | 0.751635 | 3 | 0 | 3 |
| RIMKLA | U2AF1 | 0.729307 | 3 | 0 | 3 |
| RIMKLA | TMEM53 | 0.707592 | 3 | 0 | 3 |
| RIMKLA | DOCK11 | 0.699783 | 3 | 0 | 3 |
| RIMKLA | DZIP1L | 0.699273 | 3 | 0 | 3 |
| RIMKLA | EIF4A3 | 0.697343 | 3 | 0 | 3 |
| RIMKLA | C12orf43 | 0.694677 | 3 | 0 | 3 |
| RIMKLA | POMGNT1 | 0.693817 | 3 | 0 | 3 |
| RIMKLA | LINC00630 | 0.692981 | 3 | 0 | 3 |
| RIMKLA | MEIS3 | 0.685301 | 3 | 0 | 3 |
| RIMKLA | NLGN4X | 0.683622 | 3 | 0 | 3 |
| RIMKLA | DTX3 | 0.681109 | 4 | 0 | 4 |
| RIMKLA | PACS1 | 0.680587 | 3 | 0 | 3 |
| RIMKLA | TMEM205 | 0.671085 | 4 | 0 | 3 |
| RIMKLA | BMP3 | 0.670652 | 4 | 0 | 3 |
| RIMKLA | CSRNP2 | 0.669652 | 4 | 0 | 3 |
| RIMKLA | LRRC47 | 0.665244 | 3 | 0 | 3 |
| RIMKLA | CTF1 | 0.664696 | 4 | 0 | 3 |
For details and further investigation, click here
