DDX10

 

Full name: DEAD-box helicase 10 Alias Symbol: HRH-J8|Dbp4
Type: protein-coding gene Cytoband: 11q22.3
Entrez ID: 1662 HGNC ID: HGNC:2735 Ensembl Gene: ENSG00000178105 OMIM ID: 601235
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of DDX10:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 DDX10 1662 204977_at 0.4265 0.0962
GSE20347 DDX10 1662 204977_at 0.3629 0.0291
GSE23400 DDX10 1662 204977_at 0.4370 0.0000
GSE26886 DDX10 1662 204977_at 1.2696 0.0007
GSE29001 DDX10 1662 204977_at 0.2491 0.2961
GSE38129 DDX10 1662 204977_at 0.3257 0.0054
GSE45670 DDX10 1662 204977_at 0.2163 0.2831
GSE53622 DDX10 1662 89694 0.3548 0.0000
GSE53624 DDX10 1662 89694 0.6284 0.0000
GSE63941 DDX10 1662 204977_at 0.0135 0.9820
GSE77861 DDX10 1662 204977_at 0.7098 0.0206
GSE97050 DDX10 1662 A_23_P32938 0.3363 0.3720
SRP007169 DDX10 1662 RNAseq 0.6206 0.1592
SRP008496 DDX10 1662 RNAseq 0.6830 0.0349
SRP064894 DDX10 1662 RNAseq 0.2451 0.1101
SRP133303 DDX10 1662 RNAseq 0.2233 0.1320
SRP159526 DDX10 1662 RNAseq 0.4821 0.2385
SRP193095 DDX10 1662 RNAseq -0.0620 0.6028
SRP219564 DDX10 1662 RNAseq 0.3233 0.3094
TCGA DDX10 1662 RNAseq 0.1414 0.0254

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by DDX10 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of DDX10:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 DDX10 1662 0 13 17
GSE20123 DDX10 1662 0 13 17
GSE43470 DDX10 1662 2 6 35
GSE46452 DDX10 1662 3 26 30
GSE47630 DDX10 1662 2 19 19
GSE54993 DDX10 1662 9 1 60
GSE54994 DDX10 1662 5 19 29
GSE60625 DDX10 1662 0 3 8
GSE74703 DDX10 1662 1 4 31
GSE74704 DDX10 1662 0 9 11
TCGA DDX10 1662 6 48 42

Total number of gains: 28; Total number of losses: 161; Total Number of normals: 299.  


 

Somatic mutations of DDX10:

 

Generating mutation plots.

 

Highly correlated genes for DDX10:

 

Showing top 20/1371 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
DDX10WDR750.768139403
DDX10PPP1R350.767185404
DDX10ARHGAP190.76301303
DDX10C5orf220.758926303
DDX10PIF10.755351403
DDX10MCM3AP0.749814303
DDX10TMEM170A0.741422303
DDX10SGTB0.741296303
DDX10CWF19L10.737074404
DDX10EEFSEC0.72177303
DDX10TIGD10.717803303
DDX10ZFHX30.716143303
DDX10SENP10.710943303
DDX10WDR720.703809303
DDX10ATP11C0.701963403
DDX10CHST30.700879303
DDX10PPP2R2D0.693322303
DDX10METAP1D0.691857403
DDX10POLA10.688494504
DDX10ECSIT0.687147404

For details and further investigation, click here