DENND1B

 

Full name: DENN domain containing 1B Alias Symbol: MGC27044|FLJ20054
Type: protein-coding gene Cytoband: 1q31.3
Entrez ID: 163486 HGNC ID: HGNC:28404 Ensembl Gene: ENSG00000213047 OMIM ID: 613292
Drug and gene relationship at DGIdb

 

Expression of DENND1B:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 DENND1B 163486 219696_at 0.1960 0.8075
GSE20347 DENND1B 163486 219696_at -0.9659 0.0001
GSE23400 DENND1B 163486 219696_at -0.2663 0.0100
GSE26886 DENND1B 163486 219696_at -0.0202 0.9705
GSE29001 DENND1B 163486 219696_at -0.3849 0.5716
GSE38129 DENND1B 163486 219696_at -0.5993 0.0447
GSE45670 DENND1B 163486 219696_at 0.1582 0.4441
GSE53622 DENND1B 163486 54192 -0.1938 0.0586
GSE53624 DENND1B 163486 7671 -0.6539 0.0000
GSE63941 DENND1B 163486 219696_at 1.1135 0.0496
GSE77861 DENND1B 163486 219696_at 0.0328 0.9222
GSE97050 DENND1B 163486 A_23_P201605 0.2693 0.3978
SRP007169 DENND1B 163486 RNAseq -1.8346 0.0000
SRP008496 DENND1B 163486 RNAseq -1.2228 0.0000
SRP064894 DENND1B 163486 RNAseq -0.6129 0.0077
SRP133303 DENND1B 163486 RNAseq -0.0436 0.8014
SRP159526 DENND1B 163486 RNAseq -0.3502 0.3711
SRP193095 DENND1B 163486 RNAseq -0.5806 0.0001
SRP219564 DENND1B 163486 RNAseq -0.2103 0.7038
TCGA DENND1B 163486 RNAseq 0.0270 0.7800

Upregulated datasets: 1; Downregulated datasets: 2.  


 

Survival by DENND1B expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of DENND1B:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 DENND1B 163486 7 0 23
GSE20123 DENND1B 163486 7 0 23
GSE43470 DENND1B 163486 6 1 36
GSE46452 DENND1B 163486 3 1 55
GSE47630 DENND1B 163486 14 0 26
GSE54993 DENND1B 163486 0 6 64
GSE54994 DENND1B 163486 16 0 37
GSE60625 DENND1B 163486 0 0 11
GSE74703 DENND1B 163486 6 1 29
GSE74704 DENND1B 163486 2 0 18
TCGA DENND1B 163486 41 6 49

Total number of gains: 102; Total number of losses: 15; Total Number of normals: 371.  


 

Somatic mutations of DENND1B:

 

Generating mutation plots.

 

Highly correlated genes for DENND1B:

 

Showing top 20/762 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
DENND1BDDX520.824353303
DENND1BTPP20.769504303
DENND1BCCIN0.760888303
DENND1BZNF1950.75992303
DENND1BGOLGA50.74441404
DENND1BTP53AIP10.744193303
DENND1BC3orf380.740235303
DENND1BHSDL20.73508303
DENND1BCHD20.733576303
DENND1BRCOR30.733457303
DENND1BPPHLN10.731916303
DENND1BPANK30.731167505
DENND1BF120.729934404
DENND1BFAM200A0.726026303
DENND1BECD0.717031303
DENND1BHTATIP20.71691303
DENND1BNAV20.713838303
DENND1BC1orf430.709936303
DENND1BSOS10.703705303
DENND1BBAG40.703349303

For details and further investigation, click here