| Full name: EMC3 antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 3p25.3 | ||
| Entrez ID: 442075 | HGNC ID: HGNC:49223 | Ensembl Gene: ENSG00000180385 | OMIM ID: |
Expression of EMC3-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | EMC3-AS1 | 442075 | 237005_at | 0.4361 | 0.2089 | |
| GSE26886 | EMC3-AS1 | 442075 | 237005_at | 0.0196 | 0.9047 | |
| GSE45670 | EMC3-AS1 | 442075 | 237005_at | 0.1660 | 0.3001 | |
| GSE63941 | EMC3-AS1 | 442075 | 237005_at | 1.4931 | 0.0009 | |
| GSE77861 | EMC3-AS1 | 442075 | 237005_at | 0.1292 | 0.3130 | |
| SRP007169 | EMC3-AS1 | 442075 | RNAseq | -1.4410 | 0.0184 | |
| SRP064894 | EMC3-AS1 | 442075 | RNAseq | -0.1516 | 0.5168 | |
| SRP133303 | EMC3-AS1 | 442075 | RNAseq | -0.1233 | 0.5971 | |
| SRP159526 | EMC3-AS1 | 442075 | RNAseq | 0.6838 | 0.2160 | |
| SRP193095 | EMC3-AS1 | 442075 | RNAseq | 0.0239 | 0.8805 | |
| SRP219564 | EMC3-AS1 | 442075 | RNAseq | -0.0718 | 0.8927 |
Upregulated datasets: 1; Downregulated datasets: 1.
Copy number change of EMC3-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | EMC3-AS1 | 442075 | 1 | 18 | 11 | |
| GSE20123 | EMC3-AS1 | 442075 | 1 | 18 | 11 | |
| GSE43470 | EMC3-AS1 | 442075 | 1 | 20 | 22 | |
| GSE46452 | EMC3-AS1 | 442075 | 2 | 17 | 40 | |
| GSE47630 | EMC3-AS1 | 442075 | 2 | 23 | 15 | |
| GSE54993 | EMC3-AS1 | 442075 | 6 | 1 | 63 | |
| GSE54994 | EMC3-AS1 | 442075 | 3 | 31 | 19 | |
| GSE60625 | EMC3-AS1 | 442075 | 5 | 0 | 6 | |
| GSE74703 | EMC3-AS1 | 442075 | 1 | 16 | 19 | |
| GSE74704 | EMC3-AS1 | 442075 | 1 | 11 | 8 |
Total number of gains: 23; Total number of losses: 155; Total Number of normals: 214.
Somatic mutations of EMC3-AS1:
Generating mutation plots.
Highly correlated genes for EMC3-AS1:
Showing top 20/66 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| EMC3-AS1 | LSR | 0.721043 | 3 | 0 | 3 |
| EMC3-AS1 | JAG2 | 0.718406 | 3 | 0 | 3 |
| EMC3-AS1 | CHD7 | 0.693371 | 3 | 0 | 3 |
| EMC3-AS1 | IGSF9 | 0.675203 | 3 | 0 | 3 |
| EMC3-AS1 | NUP210 | 0.671109 | 4 | 0 | 4 |
| EMC3-AS1 | EXO1 | 0.669727 | 3 | 0 | 3 |
| EMC3-AS1 | PTPN2 | 0.669154 | 3 | 0 | 3 |
| EMC3-AS1 | ANP32E | 0.667259 | 3 | 0 | 3 |
| EMC3-AS1 | NUCKS1 | 0.652427 | 3 | 0 | 3 |
| EMC3-AS1 | ST6GALNAC2 | 0.645113 | 3 | 0 | 3 |
| EMC3-AS1 | VRK1 | 0.641755 | 3 | 0 | 3 |
| EMC3-AS1 | MAP3K11 | 0.640058 | 3 | 0 | 3 |
| EMC3-AS1 | CNIH4 | 0.637558 | 3 | 0 | 3 |
| EMC3-AS1 | ZNF692 | 0.636207 | 3 | 0 | 3 |
| EMC3-AS1 | IPO9 | 0.63374 | 4 | 0 | 3 |
| EMC3-AS1 | FANCL | 0.63147 | 3 | 0 | 3 |
| EMC3-AS1 | BRCA2 | 0.628959 | 3 | 0 | 3 |
| EMC3-AS1 | HEATR1 | 0.626297 | 3 | 0 | 3 |
| EMC3-AS1 | WDR66 | 0.62557 | 3 | 0 | 3 |
| EMC3-AS1 | LRP5 | 0.622556 | 3 | 0 | 3 |
For details and further investigation, click here
