FAM118B

 

Full name: family with sequence similarity 118 member B Alias Symbol: FLJ21103
Type: protein-coding gene Cytoband: 11q24.2
Entrez ID: 79607 HGNC ID: HGNC:26110 Ensembl Gene: ENSG00000197798 OMIM ID: 616587
Drug and gene relationship at DGIdb

 

Expression of FAM118B:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 FAM118B 79607 223386_at 0.1856 0.6299
GSE26886 FAM118B 79607 223386_at -0.7591 0.0042
GSE45670 FAM118B 79607 223386_at 0.2169 0.2578
GSE53622 FAM118B 79607 104755 0.2079 0.0028
GSE53624 FAM118B 79607 104755 0.1649 0.0656
GSE63941 FAM118B 79607 223386_at -1.0364 0.0498
GSE77861 FAM118B 79607 223386_at 0.3085 0.2593
GSE97050 FAM118B 79607 A_23_P319492 0.1301 0.5102
SRP007169 FAM118B 79607 RNAseq 0.2652 0.6005
SRP008496 FAM118B 79607 RNAseq -0.0771 0.8062
SRP064894 FAM118B 79607 RNAseq 0.2187 0.1572
SRP133303 FAM118B 79607 RNAseq 0.3821 0.0242
SRP159526 FAM118B 79607 RNAseq -0.0565 0.8094
SRP193095 FAM118B 79607 RNAseq -0.5702 0.0057
SRP219564 FAM118B 79607 RNAseq -0.2773 0.5307
TCGA FAM118B 79607 RNAseq -0.1701 0.0304

Upregulated datasets: 0; Downregulated datasets: 1.  

 

Survival by FAM118B expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of FAM118B:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 FAM118B 79607 0 13 17
GSE20123 FAM118B 79607 0 13 17
GSE43470 FAM118B 79607 2 7 34
GSE46452 FAM118B 79607 3 26 30
GSE47630 FAM118B 79607 2 19 19
GSE54993 FAM118B 79607 10 0 60
GSE54994 FAM118B 79607 5 19 29
GSE60625 FAM118B 79607 0 3 8
GSE74703 FAM118B 79607 1 5 30
GSE74704 FAM118B 79607 0 9 11
TCGA FAM118B 79607 7 50 39

Total number of gains: 30; Total number of losses: 164; Total Number of normals: 294.  

 

Somatic mutations of FAM118B:

 

Generating mutation plots.

 

Highly correlated genes for FAM118B:

 

Showing top 20/368 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
FAM118BPRDX40.756124303
FAM118BCOQ30.750703303
FAM118BNIPA20.735554303
FAM118BXPOT0.735227303
FAM118BHSPA140.734299303
FAM118BMOSPD10.731072303
FAM118BMCOLN10.730636303
FAM118BSTRAP0.729211404
FAM118BTM2D30.728945303
FAM118BIMPAD10.727616303
FAM118BAPI50.721293303
FAM118BCDC400.717569303
FAM118BBMPR1A0.716522303
FAM118BZNF350.71517403
FAM118BSTAMBPL10.712484303
FAM118BSMC30.712125303
FAM118BTAGAP0.711814303
FAM118BANKRD440.711195303
FAM118BPKD20.710647404
FAM118BMTFMT0.709937403

For details and further investigation, click here