FAM189A2

 

Full name: family with sequence similarity 189 member A2 Alias Symbol: X123
Type: protein-coding gene Cytoband: 9q21.12
Entrez ID: 9413 HGNC ID: HGNC:24820 Ensembl Gene: ENSG00000135063 OMIM ID: 607710
Drug and gene relationship at DGIdb

 

Expression of FAM189A2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 FAM189A2 9413 213900_at -1.7513 0.0265
GSE20347 FAM189A2 9413 213900_at -1.2608 0.0000
GSE23400 FAM189A2 9413 213900_at -0.6412 0.0000
GSE26886 FAM189A2 9413 213900_at -1.2745 0.0002
GSE29001 FAM189A2 9413 213900_at -1.6031 0.0000
GSE38129 FAM189A2 9413 213900_at -1.6837 0.0000
GSE45670 FAM189A2 9413 213900_at -1.1399 0.0001
GSE53622 FAM189A2 9413 57317 -2.6534 0.0000
GSE53624 FAM189A2 9413 57317 -3.2228 0.0000
GSE63941 FAM189A2 9413 213900_at 0.3805 0.3488
GSE77861 FAM189A2 9413 213900_at -0.6667 0.0022
GSE97050 FAM189A2 9413 A_32_P43717 -0.5234 0.3181
SRP007169 FAM189A2 9413 RNAseq -1.4031 0.1013
SRP064894 FAM189A2 9413 RNAseq -1.5142 0.0000
SRP133303 FAM189A2 9413 RNAseq -2.1608 0.0000
SRP193095 FAM189A2 9413 RNAseq -2.2804 0.0000
SRP219564 FAM189A2 9413 RNAseq -1.4969 0.1075
TCGA FAM189A2 9413 RNAseq -1.8441 0.0000

Upregulated datasets: 0; Downregulated datasets: 12.  


 

Survival by FAM189A2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of FAM189A2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 FAM189A2 9413 6 10 14
GSE20123 FAM189A2 9413 6 10 14
GSE43470 FAM189A2 9413 6 5 32
GSE46452 FAM189A2 9413 7 14 38
GSE47630 FAM189A2 9413 1 19 20
GSE54993 FAM189A2 9413 5 1 64
GSE54994 FAM189A2 9413 4 13 36
GSE60625 FAM189A2 9413 0 0 11
GSE74703 FAM189A2 9413 5 4 27
GSE74704 FAM189A2 9413 3 7 10
TCGA FAM189A2 9413 19 28 49

Total number of gains: 62; Total number of losses: 111; Total Number of normals: 315.  


 

Somatic mutations of FAM189A2:

 

Generating mutation plots.

 

Highly correlated genes for FAM189A2:

 

Showing top 20/869 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
FAM189A2SH3BGRL20.825074606
FAM189A2SHROOM30.784978606
FAM189A2FAM219B0.774097404
FAM189A2SORBS20.76560810010
FAM189A2SUOX0.7462810010
FAM189A2TNXB0.745963403
FAM189A2XKR40.739777404
FAM189A2GAB20.73848511011
FAM189A2BTC0.738354909
FAM189A2BOC0.734394606
FAM189A2KAT2B0.73118910010
FAM189A2COBL0.72808910010
FAM189A2MPC10.72573710010
FAM189A2PPP1R3C0.72568710010
FAM189A2AK90.724807606
FAM189A2FAM95B10.724123404
FAM189A2UBL30.72194610010
FAM189A2KIAA02320.7179611011
FAM189A2TFAP2B0.7168810010
FAM189A2SLC27A60.71420511010

For details and further investigation, click here