FAT3

 

Full name: FAT atypical cadherin 3 Alias Symbol: KIAA1989|CDHF15|CDHR10
Type: protein-coding gene Cytoband: 11q14.3
Entrez ID: 120114 HGNC ID: HGNC:23112 Ensembl Gene: ENSG00000165323 OMIM ID: 612483
Drug and gene relationship at DGIdb

 

Expression of FAT3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 FAT3 120114 236029_at -0.8858 0.6166
GSE26886 FAT3 120114 236029_at 0.4570 0.2402
GSE45670 FAT3 120114 236029_at -1.1118 0.0153
GSE53622 FAT3 120114 89440 -0.0377 0.9027
GSE53624 FAT3 120114 89440 0.5515 0.0036
GSE63941 FAT3 120114 236029_at -2.6238 0.0058
GSE77861 FAT3 120114 236029_at -0.0888 0.5023
GSE97050 FAT3 120114 A_33_P3257513 0.2928 0.3309
SRP007169 FAT3 120114 RNAseq 2.3964 0.0010
SRP133303 FAT3 120114 RNAseq -0.3885 0.4638
SRP159526 FAT3 120114 RNAseq -0.4908 0.4835
SRP193095 FAT3 120114 RNAseq 0.0135 0.9718
TCGA FAT3 120114 RNAseq -0.8379 0.0278

Upregulated datasets: 1; Downregulated datasets: 2.  


 

Survival by FAT3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of FAT3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 FAT3 120114 3 10 17
GSE20123 FAT3 120114 3 10 17
GSE43470 FAT3 120114 2 5 36
GSE46452 FAT3 120114 5 24 30
GSE47630 FAT3 120114 2 19 19
GSE54993 FAT3 120114 8 2 60
GSE54994 FAT3 120114 5 19 29
GSE60625 FAT3 120114 0 3 8
GSE74703 FAT3 120114 1 4 31
GSE74704 FAT3 120114 3 6 11
TCGA FAT3 120114 14 40 42

Total number of gains: 46; Total number of losses: 142; Total Number of normals: 300.  


 

Somatic mutations of FAT3:

 

Generating mutation plots.

 

Highly correlated genes for FAT3:

 

Showing top 20/295 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
FAT3SGCD0.749289404
FAT3MGARP0.738602303
FAT3ENPP60.717997404
FAT3PDZRN40.708612403
FAT3PDE3A0.697619403
FAT3ZNF4710.689287303
FAT3CORO2B0.688539403
FAT3CACNA1C0.685224505
FAT3MYOT0.684702303
FAT3SHISA30.684041504
FAT3SLC2A130.67808404
FAT3SYT110.671211504
FAT3RBM70.662627303
FAT3ITGBL10.65686404
FAT3STAMBPL10.655804303
FAT3PIGB0.653448303
FAT3SLC4A40.652137404
FAT3JAM20.649761403
FAT3PARVA0.649708504
FAT3ARHGEF250.649417303

For details and further investigation, click here