SHISA3

 

Full name: shisa family member 3 Alias Symbol: hShisa3
Type: protein-coding gene Cytoband: 4p13
Entrez ID: 152573 HGNC ID: HGNC:25159 Ensembl Gene: ENSG00000178343 OMIM ID: 617325
Drug and gene relationship at DGIdb

 

Expression of SHISA3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SHISA3 152573 229485_x_at -1.0736 0.3581
GSE26886 SHISA3 152573 229485_x_at 0.1195 0.1638
GSE45670 SHISA3 152573 229485_x_at -1.3141 0.0005
GSE53622 SHISA3 152573 22767 -2.4514 0.0000
GSE53624 SHISA3 152573 22767 -2.3204 0.0000
GSE63941 SHISA3 152573 229485_x_at -4.9116 0.0000
GSE77861 SHISA3 152573 229485_x_at 0.0046 0.9572
GSE97050 SHISA3 152573 A_23_P41476 -0.6292 0.2546
SRP133303 SHISA3 152573 RNAseq -1.3350 0.0724
SRP159526 SHISA3 152573 RNAseq -0.0424 0.9641
TCGA SHISA3 152573 RNAseq -2.0980 0.0004

Upregulated datasets: 0; Downregulated datasets: 5.  


 

Survival by SHISA3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SHISA3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SHISA3 152573 0 16 14
GSE20123 SHISA3 152573 0 16 14
GSE43470 SHISA3 152573 0 14 29
GSE46452 SHISA3 152573 1 36 22
GSE47630 SHISA3 152573 1 18 21
GSE54993 SHISA3 152573 7 0 63
GSE54994 SHISA3 152573 4 9 40
GSE60625 SHISA3 152573 0 0 11
GSE74703 SHISA3 152573 0 12 24
GSE74704 SHISA3 152573 0 9 11
TCGA SHISA3 152573 12 41 43

Total number of gains: 25; Total number of losses: 171; Total Number of normals: 292.  


 

Somatic mutations of SHISA3:

 

Generating mutation plots.

 

Highly correlated genes for SHISA3:

 

Showing top 20/429 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SHISA3MGARP0.857256303
SHISA3ABCA60.844237505
SHISA3SORCS10.838465303
SHISA3ITGBL10.829783303
SHISA3TMEM1000.803659606
SHISA3RSPO20.803192303
SHISA3PCDH90.802317404
SHISA3BHMT20.79042505
SHISA3CACNA1C0.778962404
SHISA3ASPA0.77842505
SHISA3PLCXD30.772705404
SHISA3MYOC0.768355504
SHISA3COX7A10.760932505
SHISA3CBX70.760497404
SHISA3ZNF5820.7563404
SHISA3ARHGAP200.755207303
SHISA3FGL20.754918505
SHISA3PABPC50.750515505
SHISA3ALDH8A10.75017303
SHISA3IL6ST0.74902505

For details and further investigation, click here