| Full name: FRMD6 antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 14q22.1 | ||
| Entrez ID: 145438 | HGNC ID: HGNC:20129 | Ensembl Gene: ENSG00000273888 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of FRMD6-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | FRMD6-AS1 | 145438 | 233106_at | 0.2631 | 0.5327 | |
| GSE26886 | FRMD6-AS1 | 145438 | 233106_at | 0.8769 | 0.0017 | |
| GSE45670 | FRMD6-AS1 | 145438 | 233106_at | 0.2507 | 0.2738 | |
| GSE53622 | FRMD6-AS1 | 145438 | 16382 | 0.1825 | 0.2839 | |
| GSE53624 | FRMD6-AS1 | 145438 | 16382 | -0.0332 | 0.8154 | |
| GSE63941 | FRMD6-AS1 | 145438 | 233106_at | -0.4163 | 0.3983 | |
| GSE77861 | FRMD6-AS1 | 145438 | 233106_at | 0.2837 | 0.0729 | |
| SRP064894 | FRMD6-AS1 | 145438 | RNAseq | 0.4067 | 0.1640 | |
| SRP133303 | FRMD6-AS1 | 145438 | RNAseq | -0.2359 | 0.0491 | |
| SRP159526 | FRMD6-AS1 | 145438 | RNAseq | 0.6893 | 0.1604 | |
| SRP193095 | FRMD6-AS1 | 145438 | RNAseq | 0.0138 | 0.9488 | |
| SRP219564 | FRMD6-AS1 | 145438 | RNAseq | -0.1188 | 0.8084 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by FRMD6-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of FRMD6-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | FRMD6-AS1 | 145438 | 9 | 3 | 18 | |
| GSE20123 | FRMD6-AS1 | 145438 | 9 | 3 | 18 | |
| GSE43470 | FRMD6-AS1 | 145438 | 9 | 1 | 33 | |
| GSE46452 | FRMD6-AS1 | 145438 | 16 | 3 | 40 | |
| GSE47630 | FRMD6-AS1 | 145438 | 11 | 10 | 19 | |
| GSE54993 | FRMD6-AS1 | 145438 | 3 | 8 | 59 | |
| GSE54994 | FRMD6-AS1 | 145438 | 19 | 4 | 30 | |
| GSE60625 | FRMD6-AS1 | 145438 | 0 | 2 | 9 | |
| GSE74703 | FRMD6-AS1 | 145438 | 8 | 1 | 27 | |
| GSE74704 | FRMD6-AS1 | 145438 | 4 | 2 | 14 |
Total number of gains: 88; Total number of losses: 37; Total Number of normals: 267.
Somatic mutations of FRMD6-AS1:
Generating mutation plots.
Highly correlated genes for FRMD6-AS1:
Showing top 20/120 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| FRMD6-AS1 | CA9 | 0.749568 | 3 | 0 | 3 |
| FRMD6-AS1 | LYAR | 0.721242 | 3 | 0 | 3 |
| FRMD6-AS1 | EXT1 | 0.718349 | 3 | 0 | 3 |
| FRMD6-AS1 | RHPN2 | 0.70998 | 3 | 0 | 3 |
| FRMD6-AS1 | NCAPG | 0.706219 | 3 | 0 | 3 |
| FRMD6-AS1 | TCOF1 | 0.699855 | 3 | 0 | 3 |
| FRMD6-AS1 | PGAP1 | 0.697205 | 3 | 0 | 3 |
| FRMD6-AS1 | ARID3A | 0.688676 | 3 | 0 | 3 |
| FRMD6-AS1 | APBA3 | 0.687532 | 3 | 0 | 3 |
| FRMD6-AS1 | TWIST1 | 0.68693 | 4 | 0 | 4 |
| FRMD6-AS1 | GPR180 | 0.683895 | 3 | 0 | 3 |
| FRMD6-AS1 | GGCX | 0.676015 | 3 | 0 | 3 |
| FRMD6-AS1 | TCF24 | 0.668348 | 3 | 0 | 3 |
| FRMD6-AS1 | COL16A1 | 0.666519 | 3 | 0 | 3 |
| FRMD6-AS1 | BRD9 | 0.666442 | 3 | 0 | 3 |
| FRMD6-AS1 | SLC25A37 | 0.666326 | 3 | 0 | 3 |
| FRMD6-AS1 | PLOD2 | 0.663057 | 3 | 0 | 3 |
| FRMD6-AS1 | RIN1 | 0.661726 | 3 | 0 | 3 |
| FRMD6-AS1 | ORC3 | 0.660023 | 3 | 0 | 3 |
| FRMD6-AS1 | MCM3AP-AS1 | 0.659029 | 3 | 0 | 3 |
For details and further investigation, click here
