| Full name: LMBR1 domain containing 1 | Alias Symbol: FLJ11240|bA810I22.1|cblF | ||
| Type: protein-coding gene | Cytoband: 6q13 | ||
| Entrez ID: 55788 | HGNC ID: HGNC:23038 | Ensembl Gene: ENSG00000168216 | OMIM ID: 612625 |
| Drug and gene relationship at DGIdb | |||
Expression of LMBRD1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LMBRD1 | 55788 | 218191_s_at | -0.9855 | 0.0140 | |
| GSE20347 | LMBRD1 | 55788 | 218191_s_at | -1.2931 | 0.0000 | |
| GSE23400 | LMBRD1 | 55788 | 218191_s_at | -0.8551 | 0.0000 | |
| GSE26886 | LMBRD1 | 55788 | 218191_s_at | -2.1736 | 0.0000 | |
| GSE29001 | LMBRD1 | 55788 | 218191_s_at | -1.0866 | 0.0014 | |
| GSE38129 | LMBRD1 | 55788 | 218191_s_at | -1.1877 | 0.0000 | |
| GSE45670 | LMBRD1 | 55788 | 218191_s_at | -0.8469 | 0.0000 | |
| GSE53622 | LMBRD1 | 55788 | 118343 | -0.9674 | 0.0000 | |
| GSE53624 | LMBRD1 | 55788 | 118343 | -1.1241 | 0.0000 | |
| GSE63941 | LMBRD1 | 55788 | 218191_s_at | -1.1928 | 0.0058 | |
| GSE77861 | LMBRD1 | 55788 | 218191_s_at | -0.9962 | 0.0043 | |
| GSE97050 | LMBRD1 | 55788 | A_33_P3359115 | -0.5449 | 0.1313 | |
| SRP007169 | LMBRD1 | 55788 | RNAseq | -1.6375 | 0.0000 | |
| SRP008496 | LMBRD1 | 55788 | RNAseq | -1.4226 | 0.0000 | |
| SRP064894 | LMBRD1 | 55788 | RNAseq | -0.8871 | 0.0000 | |
| SRP133303 | LMBRD1 | 55788 | RNAseq | -0.8006 | 0.0000 | |
| SRP159526 | LMBRD1 | 55788 | RNAseq | -1.0470 | 0.0048 | |
| SRP193095 | LMBRD1 | 55788 | RNAseq | -1.2263 | 0.0000 | |
| SRP219564 | LMBRD1 | 55788 | RNAseq | -1.1085 | 0.0142 | |
| TCGA | LMBRD1 | 55788 | RNAseq | -0.2806 | 0.0000 |
Upregulated datasets: 0; Downregulated datasets: 11.
Survival by LMBRD1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of LMBRD1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LMBRD1 | 55788 | 2 | 3 | 25 | |
| GSE20123 | LMBRD1 | 55788 | 1 | 3 | 26 | |
| GSE43470 | LMBRD1 | 55788 | 3 | 0 | 40 | |
| GSE46452 | LMBRD1 | 55788 | 2 | 11 | 46 | |
| GSE47630 | LMBRD1 | 55788 | 8 | 4 | 28 | |
| GSE54993 | LMBRD1 | 55788 | 3 | 2 | 65 | |
| GSE54994 | LMBRD1 | 55788 | 10 | 4 | 39 | |
| GSE60625 | LMBRD1 | 55788 | 0 | 2 | 9 | |
| GSE74703 | LMBRD1 | 55788 | 3 | 0 | 33 | |
| GSE74704 | LMBRD1 | 55788 | 0 | 2 | 18 | |
| TCGA | LMBRD1 | 55788 | 11 | 20 | 65 |
Total number of gains: 43; Total number of losses: 51; Total Number of normals: 394.
Somatic mutations of LMBRD1:
Generating mutation plots.
Highly correlated genes for LMBRD1:
Showing top 20/1835 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LMBRD1 | SH3BGRL2 | 0.849077 | 7 | 0 | 7 |
| LMBRD1 | HPGD | 0.828061 | 11 | 0 | 11 |
| LMBRD1 | GPD1L | 0.828011 | 11 | 0 | 11 |
| LMBRD1 | SHROOM3 | 0.819167 | 7 | 0 | 7 |
| LMBRD1 | SNORA68 | 0.818662 | 4 | 0 | 4 |
| LMBRD1 | CGNL1 | 0.816513 | 7 | 0 | 7 |
| LMBRD1 | KAT2B | 0.800812 | 13 | 0 | 12 |
| LMBRD1 | ACADM | 0.79953 | 11 | 0 | 11 |
| LMBRD1 | FAM3D | 0.789138 | 6 | 0 | 6 |
| LMBRD1 | TMPRSS11B | 0.787848 | 6 | 0 | 6 |
| LMBRD1 | UBL3 | 0.786608 | 12 | 0 | 10 |
| LMBRD1 | BEX4 | 0.784692 | 11 | 0 | 11 |
| LMBRD1 | RAP1A | 0.781909 | 11 | 0 | 11 |
| LMBRD1 | FAM214A | 0.77981 | 7 | 0 | 7 |
| LMBRD1 | GBP6 | 0.779517 | 4 | 0 | 4 |
| LMBRD1 | GALNT12 | 0.777441 | 11 | 0 | 11 |
| LMBRD1 | MPC1 | 0.773542 | 11 | 0 | 10 |
| LMBRD1 | CNN3 | 0.77314 | 9 | 0 | 9 |
| LMBRD1 | SECISBP2L | 0.769768 | 12 | 0 | 12 |
| LMBRD1 | CTTNBP2 | 0.769342 | 7 | 0 | 7 |
For details and further investigation, click here
