GRAP

 

Full name: GRB2 related adaptor protein Alias Symbol: 
Type: protein-coding gene Cytoband: 17p11.2
Entrez ID: 10750 HGNC ID: HGNC:4562 Ensembl Gene: ENSG00000154016 OMIM ID: 604330
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of GRAP:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 GRAP 10750 229726_at 0.0455 0.9047
GSE20347 GRAP 10750 206620_at -0.0501 0.5081
GSE23400 GRAP 10750 206620_at -0.1000 0.0003
GSE26886 GRAP 10750 229726_at 0.3811 0.0209
GSE29001 GRAP 10750 206620_at -0.1112 0.3115
GSE38129 GRAP 10750 206620_at -0.0669 0.3903
GSE45670 GRAP 10750 229726_at 0.0458 0.6607
GSE63941 GRAP 10750 206620_at 0.0088 0.9665
GSE77861 GRAP 10750 229726_at -0.0448 0.7632
GSE97050 GRAP 10750 A_23_P392962 0.4618 0.2467
SRP007169 GRAP 10750 RNAseq 2.6160 0.0271
SRP064894 GRAP 10750 RNAseq 1.4243 0.0000
SRP133303 GRAP 10750 RNAseq -0.1585 0.4680
SRP159526 GRAP 10750 RNAseq -0.7573 0.2251
SRP193095 GRAP 10750 RNAseq 0.7318 0.0193
SRP219564 GRAP 10750 RNAseq 0.8871 0.0072
TCGA GRAP 10750 RNAseq 0.2308 0.1660

Upregulated datasets: 2; Downregulated datasets: 0.  


 

Survival by GRAP expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of GRAP:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 GRAP 10750 4 3 23
GSE20123 GRAP 10750 4 4 22
GSE43470 GRAP 10750 1 5 37
GSE46452 GRAP 10750 34 1 24
GSE47630 GRAP 10750 7 1 32
GSE54993 GRAP 10750 3 3 64
GSE54994 GRAP 10750 6 6 41
GSE60625 GRAP 10750 4 0 7
GSE74703 GRAP 10750 1 2 33
GSE74704 GRAP 10750 3 1 16
TCGA GRAP 10750 19 24 53

Total number of gains: 86; Total number of losses: 50; Total Number of normals: 352.  


 

Somatic mutations of GRAP:

 

Generating mutation plots.

 

Highly correlated genes for GRAP:

 

Showing top 20/358 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
GRAPNKAIN40.830097303
GRAPFFAR10.775354303
GRAPCLTCL10.770445303
GRAPODF3L20.765922303
GRAPCHST130.756884303
GRAPRHPN10.746884303
GRAPC19orf810.736401303
GRAPDNAJB80.735177303
GRAPSPRED30.732213303
GRAPMGAT5B0.731207303
GRAPPEX11G0.7301404
GRAPTMEM1790.728648303
GRAPISLR20.726682303
GRAPTUT10.723131303
GRAPCOL20A10.720902303
GRAPGJD40.720392303
GRAPPHGR10.718009303
GRAPMAPK150.708923303
GRAPRNF1510.708776303
GRAPPLA2G4F0.705087404

For details and further investigation, click here