GRIN2A

 

Full name: glutamate ionotropic receptor NMDA type subunit 2A Alias Symbol: GluN2A
Type: protein-coding gene Cytoband: 16p13.2
Entrez ID: 2903 HGNC ID: HGNC:4585 Ensembl Gene: ENSG00000183454 OMIM ID: 138253
Drug and gene relationship at DGIdb

 

GRIN2A involved pathways:

KEGG pathway Description View
hsa04020Calcium signaling pathway
hsa04024cAMP signaling pathway
hsa04713Circadian entrainment
hsa04720Long-term potentiation
hsa04724Glutamatergic synapse
hsa04728Dopaminergic synapse
hsa05014Amyotrophic lateral sclerosis (ALS)
hsa05030Cocaine addiction
hsa05031Amphetamine addiction
hsa05034Alcoholism

 

Expression of GRIN2A:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 GRIN2A 2903 206534_at -0.3835 0.4772
GSE20347 GRIN2A 2903 206534_at -0.0682 0.4419
GSE23400 GRIN2A 2903 206534_at -0.2001 0.0000
GSE26886 GRIN2A 2903 206534_at -0.2468 0.0094
GSE29001 GRIN2A 2903 206534_at -0.3206 0.0577
GSE38129 GRIN2A 2903 206534_at -0.1684 0.0734
GSE45670 GRIN2A 2903 206534_at -0.1620 0.0761
GSE53622 GRIN2A 2903 26806 -1.0890 0.0000
GSE53624 GRIN2A 2903 26806 -0.1107 0.0757
GSE63941 GRIN2A 2903 206534_at 0.2443 0.2486
GSE77861 GRIN2A 2903 206534_at -0.0513 0.6582
GSE97050 GRIN2A 2903 A_33_P3334895 -0.3994 0.5043
SRP064894 GRIN2A 2903 RNAseq -1.7099 0.0000
SRP133303 GRIN2A 2903 RNAseq -1.2230 0.0027
SRP159526 GRIN2A 2903 RNAseq -2.8943 0.0000
SRP193095 GRIN2A 2903 RNAseq -0.6755 0.0231
SRP219564 GRIN2A 2903 RNAseq -0.2248 0.8067
TCGA GRIN2A 2903 RNAseq -1.5814 0.0017

Upregulated datasets: 0; Downregulated datasets: 5.  


 

Survival by GRIN2A expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of GRIN2A:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 GRIN2A 2903 4 3 23
GSE20123 GRIN2A 2903 4 2 24
GSE43470 GRIN2A 2903 3 3 37
GSE46452 GRIN2A 2903 38 1 20
GSE47630 GRIN2A 2903 13 6 21
GSE54993 GRIN2A 2903 3 5 62
GSE54994 GRIN2A 2903 5 9 39
GSE60625 GRIN2A 2903 4 0 7
GSE74703 GRIN2A 2903 3 2 31
GSE74704 GRIN2A 2903 2 1 17
TCGA GRIN2A 2903 19 13 64

Total number of gains: 98; Total number of losses: 45; Total Number of normals: 345.  


 

Somatic mutations of GRIN2A:

 

Generating mutation plots.

 

Highly correlated genes for GRIN2A:

 

Showing top 20/791 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
GRIN2ACHRNB20.737762303
GRIN2AGKAP10.733102303
GRIN2ANACAD0.727728404
GRIN2AGPR1460.716467303
GRIN2AOR2H20.703462606
GRIN2AOR10H30.697236707
GRIN2AMUC3B0.693254404
GRIN2ARGS50.692399303
GRIN2AKRT760.687611403
GRIN2AFSCN30.684146505
GRIN2AKHDRBS20.680826504
GRIN2AASIC40.677657605
GRIN2APRDM110.67721505
GRIN2ACAP20.676894303
GRIN2AAKAP60.675722706
GRIN2AAMHR20.674199707
GRIN2AENPP60.673154303
GRIN2APRR260.668637303
GRIN2AIL1RAPL20.668174606
GRIN2AGNAT10.668126505

For details and further investigation, click here