H1FX-AS1

 

Full name: H1FX antisense RNA 1 Alias Symbol: FLJ34151
Type: non-coding RNA Cytoband: 3q21.3
Entrez ID: 339942 HGNC ID: HGNC:27953 Ensembl Gene: ENSG00000206417 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of H1FX-AS1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 H1FX-AS1 1558168_at -0.0771 0.7287
GSE26886 H1FX-AS1 1558168_at -0.2318 0.0422
GSE45670 H1FX-AS1 1558168_at -0.0111 0.9052
GSE53622 H1FX-AS1 339942 83223 -0.0166 0.9069
GSE53624 H1FX-AS1 339942 83223 0.1556 0.1292
GSE63941 H1FX-AS1 1558168_at 0.0110 0.9542
GSE77861 H1FX-AS1 1558168_at -0.0984 0.3626
SRP064894 H1FX-AS1 339942 RNAseq 0.5999 0.0274
SRP133303 H1FX-AS1 339942 RNAseq -0.2963 0.1123
SRP159526 H1FX-AS1 339942 RNAseq 0.3026 0.3981
SRP193095 H1FX-AS1 339942 RNAseq 0.6549 0.0004
SRP219564 H1FX-AS1 339942 RNAseq 0.0585 0.8862

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by H1FX-AS1 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  


Copy number change of H1FX-AS1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 H1FX-AS1 339942 17 0 13
GSE20123 H1FX-AS1 339942 17 0 13
GSE43470 H1FX-AS1 339942 19 0 24
GSE46452 H1FX-AS1 339942 14 5 40
GSE47630 H1FX-AS1 339942 18 3 19
GSE54993 H1FX-AS1 339942 2 8 60
GSE54994 H1FX-AS1 339942 32 3 18
GSE60625 H1FX-AS1 339942 0 6 5
GSE74703 H1FX-AS1 339942 17 0 19
GSE74704 H1FX-AS1 339942 13 0 7

Total number of gains: 149; Total number of losses: 25; Total Number of normals: 218.  


 

Somatic mutations of H1FX-AS1:

 

Generating mutation plots.

 

Highly correlated genes for H1FX-AS1:

 

Showing top 20/31 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
H1FX-AS1LCN20.631141303
H1FX-AS1PRCD0.612727303
H1FX-AS1FANCD2OS0.611435303
H1FX-AS1RBP50.609568303
H1FX-AS1GJB50.596131303
H1FX-AS1STAB20.593095403
H1FX-AS1NRAP0.590602403
H1FX-AS1RORC0.576774303
H1FX-AS1GK0.5753303
H1FX-AS1LINC003120.574142303
H1FX-AS1SRD5A10.567332303
H1FX-AS1LRG10.560201403
H1FX-AS1LINC012260.55822303
H1FX-AS1LINC011920.557308403
H1FX-AS1PHF70.556222403
H1FX-AS1HUS1B0.550648303
H1FX-AS1KLHDC8A0.546082303
H1FX-AS1PRRX2-AS10.541876504
H1FX-AS1IL9R0.541213403
H1FX-AS1FCGBP0.538052303

For details and further investigation, click here