| Full name: photoreceptor disc component | Alias Symbol: RP36 | ||
| Type: protein-coding gene | Cytoband: 17q25.1 | ||
| Entrez ID: 768206 | HGNC ID: HGNC:32528 | Ensembl Gene: ENSG00000214140 | OMIM ID: 610598 |
| Drug and gene relationship at DGIdb | |||
Expression of PRCD:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | PRCD | 768206 | 1556727_at | -0.0072 | 0.9834 | |
| GSE26886 | PRCD | 768206 | 1556727_at | -0.0879 | 0.3378 | |
| GSE45670 | PRCD | 768206 | 1556727_at | 0.0515 | 0.4751 | |
| GSE63941 | PRCD | 768206 | 1556727_at | 0.1472 | 0.3260 | |
| GSE77861 | PRCD | 768206 | 1556727_at | -0.0098 | 0.9204 | |
| GSE97050 | PRCD | 768206 | A_24_P517252 | -0.3969 | 0.2065 | |
| SRP133303 | PRCD | 768206 | RNAseq | -1.6101 | 0.0000 | |
| SRP159526 | PRCD | 768206 | RNAseq | -1.0951 | 0.0814 | |
| SRP219564 | PRCD | 768206 | RNAseq | -0.7635 | 0.2501 | |
| TCGA | PRCD | 768206 | RNAseq | -0.1786 | 0.5172 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by PRCD expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of PRCD:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | PRCD | 768206 | 7 | 2 | 21 | |
| GSE20123 | PRCD | 768206 | 7 | 2 | 21 | |
| GSE43470 | PRCD | 768206 | 5 | 3 | 35 | |
| GSE46452 | PRCD | 768206 | 33 | 1 | 25 | |
| GSE47630 | PRCD | 768206 | 8 | 1 | 31 | |
| GSE54993 | PRCD | 768206 | 2 | 5 | 63 | |
| GSE54994 | PRCD | 768206 | 10 | 4 | 39 | |
| GSE60625 | PRCD | 768206 | 6 | 0 | 5 | |
| GSE74703 | PRCD | 768206 | 5 | 1 | 30 | |
| GSE74704 | PRCD | 768206 | 5 | 1 | 14 | |
| TCGA | PRCD | 768206 | 31 | 10 | 55 |
Total number of gains: 119; Total number of losses: 30; Total Number of normals: 339.
Somatic mutations of PRCD:
Generating mutation plots.
Highly correlated genes for PRCD:
Showing top 20/88 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| PRCD | VMO1 | 0.710878 | 3 | 0 | 3 |
| PRCD | KRTAP4-8 | 0.67022 | 4 | 0 | 3 |
| PRCD | UPK3A | 0.658005 | 3 | 0 | 3 |
| PRCD | NT5C1A | 0.652757 | 3 | 0 | 3 |
| PRCD | SLC1A7 | 0.651033 | 4 | 0 | 4 |
| PRCD | GRIN2C | 0.64774 | 3 | 0 | 3 |
| PRCD | OTOF | 0.64672 | 4 | 0 | 3 |
| PRCD | AVPR1B | 0.645752 | 4 | 0 | 3 |
| PRCD | CFC1 | 0.640723 | 3 | 0 | 3 |
| PRCD | NEGR1-IT1 | 0.639964 | 3 | 0 | 3 |
| PRCD | AMN | 0.639692 | 3 | 0 | 3 |
| PRCD | STAC2 | 0.624028 | 5 | 0 | 3 |
| PRCD | KIF6 | 0.622427 | 4 | 0 | 3 |
| PRCD | CALCA | 0.621685 | 3 | 0 | 3 |
| PRCD | WAS | 0.614898 | 3 | 0 | 3 |
| PRCD | PCDH15 | 0.614192 | 3 | 0 | 3 |
| PRCD | H1FX-AS1 | 0.612727 | 3 | 0 | 3 |
| PRCD | PNPLA5 | 0.607999 | 4 | 0 | 3 |
| PRCD | CNTD2 | 0.605482 | 5 | 0 | 3 |
| PRCD | TSPAN32 | 0.602445 | 4 | 0 | 3 |
For details and further investigation, click here
