| Full name: long intergenic non-protein coding RNA 312 | Alias Symbol: NAG7|NAG-7|ERR10|ERR-10|LMCD1DN | ||
| Type: non-coding RNA | Cytoband: 3p25.3 | ||
| Entrez ID: 29931 | HGNC ID: HGNC:6662 | Ensembl Gene: | OMIM ID: 610485 |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00312:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00312 | 29931 | 220244_at | -0.7632 | 0.2522 | |
| GSE20347 | LINC00312 | 29931 | 220244_at | -0.1431 | 0.4088 | |
| GSE23400 | LINC00312 | 29931 | 220244_at | 0.0105 | 0.9101 | |
| GSE26886 | LINC00312 | 29931 | 240306_at | -0.2105 | 0.0967 | |
| GSE29001 | LINC00312 | 29931 | 220244_at | -0.3202 | 0.1480 | |
| GSE38129 | LINC00312 | 29931 | 220244_at | -0.2242 | 0.1818 | |
| GSE45670 | LINC00312 | 29931 | 240306_at | -0.4224 | 0.0010 | |
| GSE63941 | LINC00312 | 29931 | 240306_at | -0.3073 | 0.0917 | |
| GSE77861 | LINC00312 | 29931 | 240306_at | -0.0146 | 0.9194 | |
| SRP159526 | LINC00312 | 29931 | RNAseq | -0.1435 | 0.8976 |
Upregulated datasets: 0; Downregulated datasets: 0.
Copy number change of LINC00312:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00312 | 29931 | 1 | 18 | 11 | |
| GSE20123 | LINC00312 | 29931 | 1 | 18 | 11 | |
| GSE43470 | LINC00312 | 29931 | 0 | 20 | 23 | |
| GSE46452 | LINC00312 | 29931 | 2 | 17 | 40 | |
| GSE47630 | LINC00312 | 29931 | 1 | 23 | 16 | |
| GSE54993 | LINC00312 | 29931 | 6 | 1 | 63 | |
| GSE54994 | LINC00312 | 29931 | 2 | 32 | 19 | |
| GSE60625 | LINC00312 | 29931 | 5 | 0 | 6 | |
| GSE74703 | LINC00312 | 29931 | 0 | 17 | 19 | |
| GSE74704 | LINC00312 | 29931 | 1 | 11 | 8 | |
| TCGA | LINC00312 | 29931 | 3 | 66 | 27 |
Total number of gains: 22; Total number of losses: 223; Total Number of normals: 243.
Somatic mutations of LINC00312:
Generating mutation plots.
Highly correlated genes for LINC00312:
Showing top 20/87 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00312 | CRAT | 0.659216 | 3 | 0 | 3 |
| LINC00312 | GDF3 | 0.657336 | 3 | 0 | 3 |
| LINC00312 | SLITRK3 | 0.649566 | 3 | 0 | 3 |
| LINC00312 | SAMD10 | 0.64891 | 3 | 0 | 3 |
| LINC00312 | IL17RC | 0.645918 | 4 | 0 | 4 |
| LINC00312 | LINC01136 | 0.641458 | 4 | 0 | 3 |
| LINC00312 | ATP6V0C | 0.63638 | 3 | 0 | 3 |
| LINC00312 | GJB1 | 0.63466 | 3 | 0 | 3 |
| LINC00312 | ASIC1 | 0.631694 | 3 | 0 | 3 |
| LINC00312 | DDX25 | 0.621805 | 3 | 0 | 3 |
| LINC00312 | GAB2 | 0.62071 | 4 | 0 | 3 |
| LINC00312 | FSHB | 0.619346 | 4 | 0 | 3 |
| LINC00312 | IL5 | 0.618518 | 3 | 0 | 3 |
| LINC00312 | CYP2A13 | 0.612827 | 3 | 0 | 3 |
| LINC00312 | RAB33A | 0.610284 | 3 | 0 | 3 |
| LINC00312 | KLHDC8A | 0.602209 | 4 | 0 | 3 |
| LINC00312 | DUX1 | 0.598234 | 4 | 0 | 3 |
| LINC00312 | ABCA6 | 0.594896 | 5 | 0 | 4 |
| LINC00312 | ARHGAP30 | 0.591276 | 3 | 0 | 3 |
| LINC00312 | CACNG6 | 0.588108 | 3 | 0 | 3 |
For details and further investigation, click here
