HDAC9

 

Full name: histone deacetylase 9 Alias Symbol: KIAA0744|HDAC|MITR|HD7|HDAC7B
Type: protein-coding gene Cytoband: 7p21.1
Entrez ID: 9734 HGNC ID: HGNC:14065 Ensembl Gene: ENSG00000048052 OMIM ID: 606543
Drug and gene relationship at DGIdb

 

Expression of HDAC9:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 HDAC9 9734 205659_at -0.4756 0.6992
GSE20347 HDAC9 9734 205659_at 0.5910 0.0379
GSE23400 HDAC9 9734 205659_at -0.0164 0.8550
GSE26886 HDAC9 9734 205659_at 0.6568 0.1091
GSE29001 HDAC9 9734 205659_at 0.8095 0.0986
GSE38129 HDAC9 9734 205659_at 0.2479 0.4895
GSE45670 HDAC9 9734 205659_at 0.2595 0.6359
GSE53622 HDAC9 9734 82421 0.5289 0.0083
GSE53624 HDAC9 9734 82421 0.7726 0.0000
GSE63941 HDAC9 9734 205659_at 2.4108 0.0996
GSE77861 HDAC9 9734 205659_at 0.5352 0.1081
GSE97050 HDAC9 9734 A_24_P206317 -0.2749 0.4983
SRP007169 HDAC9 9734 RNAseq 2.0424 0.0030
SRP008496 HDAC9 9734 RNAseq 1.7643 0.0002
SRP064894 HDAC9 9734 RNAseq 1.2631 0.0000
SRP133303 HDAC9 9734 RNAseq 0.9403 0.0021
SRP159526 HDAC9 9734 RNAseq -0.0906 0.7968
SRP193095 HDAC9 9734 RNAseq 1.0061 0.0012
SRP219564 HDAC9 9734 RNAseq 0.7019 0.4538
TCGA HDAC9 9734 RNAseq -0.0195 0.9256

Upregulated datasets: 4; Downregulated datasets: 0.  


 

Survival by HDAC9 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of HDAC9:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 HDAC9 9734 15 2 13
GSE20123 HDAC9 9734 15 2 13
GSE43470 HDAC9 9734 5 0 38
GSE46452 HDAC9 9734 11 1 47
GSE47630 HDAC9 9734 9 1 30
GSE54993 HDAC9 9734 0 6 64
GSE54994 HDAC9 9734 20 2 31
GSE60625 HDAC9 9734 0 0 11
GSE74703 HDAC9 9734 5 0 31
GSE74704 HDAC9 9734 9 2 9
TCGA HDAC9 9734 55 7 34

Total number of gains: 144; Total number of losses: 23; Total Number of normals: 321.  


 

Somatic mutations of HDAC9:

 

Generating mutation plots.

 

Highly correlated genes for HDAC9:

 

Showing top 20/403 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
HDAC9WDR350.815224303
HDAC9MSI20.788975303
HDAC9CYP2U10.766739303
HDAC9MYADM0.760229303
HDAC9PYROXD20.759944303
HDAC9PI160.740058303
HDAC9FIGN0.739431303
HDAC9HSPB70.733733505
HDAC9SCML10.721781303
HDAC9PDE1A0.721206404
HDAC9FGF20.720982303
HDAC9TFCP20.720316303
HDAC9ANGEL20.71097303
HDAC9TRIM470.709432303
HDAC9PTGER40.701342404
HDAC9DHX400.701211303
HDAC9AGTPBP10.700974303
HDAC9PEG100.696995404
HDAC9ITGA70.694946404
HDAC9ARHGEF330.694681303

For details and further investigation, click here