HOXB8

 

Full name: homeobox B8 Alias Symbol: 
Type: protein-coding gene Cytoband: 17q21.32
Entrez ID: 3218 HGNC ID: HGNC:5119 Ensembl Gene: ENSG00000120068 OMIM ID: 142963
Drug and gene relationship at DGIdb

 

Expression of HOXB8:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 HOXB8 3218 221278_at 0.0678 0.8631
GSE20347 HOXB8 3218 221278_at 0.0212 0.7771
GSE23400 HOXB8 3218 221278_at -0.1492 0.0000
GSE26886 HOXB8 3218 221278_at 0.3046 0.0175
GSE29001 HOXB8 3218 221278_at 0.0209 0.8553
GSE38129 HOXB8 3218 221278_at 0.0301 0.6181
GSE45670 HOXB8 3218 221278_at 0.1036 0.2107
GSE53622 HOXB8 3218 25789 0.5750 0.0001
GSE53624 HOXB8 3218 25789 0.7611 0.0001
GSE63941 HOXB8 3218 229667_s_at 0.0760 0.7765
GSE77861 HOXB8 3218 221278_at -0.0275 0.7821
SRP159526 HOXB8 3218 RNAseq 6.4715 0.0000
TCGA HOXB8 3218 RNAseq 1.2625 0.0392

Upregulated datasets: 2; Downregulated datasets: 0.  


 

Survival by HOXB8 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of HOXB8:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 HOXB8 3218 5 2 23
GSE20123 HOXB8 3218 5 2 23
GSE43470 HOXB8 3218 3 1 39
GSE46452 HOXB8 3218 32 0 27
GSE47630 HOXB8 3218 9 0 31
GSE54993 HOXB8 3218 2 4 64
GSE54994 HOXB8 3218 10 6 37
GSE60625 HOXB8 3218 4 0 7
GSE74703 HOXB8 3218 3 1 32
GSE74704 HOXB8 3218 4 1 15
TCGA HOXB8 3218 27 6 63

Total number of gains: 104; Total number of losses: 23; Total Number of normals: 361.  


 

Somatic mutations of HOXB8:

 

Generating mutation plots.

 

Highly correlated genes for HOXB8:

 

Showing top 20/127 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
HOXB8C1orf1580.650786303
HOXB8DNAH70.640129303
HOXB8ARTN0.63424303
HOXB8SYT50.622573303
HOXB8RAPGEF30.617682303
HOXB8INCENP0.616649303
HOXB8PPP5C0.610582403
HOXB8IGF2-AS0.604229303
HOXB8PGP0.593557403
HOXB8FSCN20.592445303
HOXB8GRM40.584736705
HOXB8NEUROD20.584462303
HOXB8NPFFR10.58407303
HOXB8TAOK20.583093303
HOXB8FAM204A0.581939303
HOXB8CORT0.57737303
HOXB8HMX10.577334303
HOXB8EPPK10.57681303
HOXB8BAIAP30.576037503
HOXB8CACNA1I0.57552605

For details and further investigation, click here