| Full name: homeobox D1 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 2q31.1 | ||
| Entrez ID: 3231 | HGNC ID: HGNC:5132 | Ensembl Gene: ENSG00000128645 | OMIM ID: 142987 |
| Related drugs: TRETINOIN... [more] | |||
Expression of HOXD1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | HOXD1 | 3231 | 205975_s_at | 0.3499 | 0.4379 | |
| GSE20347 | HOXD1 | 3231 | 205975_s_at | -0.1179 | 0.1451 | |
| GSE23400 | HOXD1 | 3231 | 205975_s_at | -0.0537 | 0.2366 | |
| GSE26886 | HOXD1 | 3231 | 205975_s_at | 0.4366 | 0.1066 | |
| GSE29001 | HOXD1 | 3231 | 205975_s_at | -0.0894 | 0.6098 | |
| GSE38129 | HOXD1 | 3231 | 205975_s_at | -0.0435 | 0.6839 | |
| GSE45670 | HOXD1 | 3231 | 205975_s_at | 0.3381 | 0.2811 | |
| GSE63941 | HOXD1 | 3231 | 205975_s_at | 0.6407 | 0.3031 | |
| GSE77861 | HOXD1 | 3231 | 205975_s_at | -0.0442 | 0.6836 | |
| SRP159526 | HOXD1 | 3231 | RNAseq | 1.3782 | 0.0190 | |
| SRP219564 | HOXD1 | 3231 | RNAseq | 1.6273 | 0.0228 | |
| TCGA | HOXD1 | 3231 | RNAseq | 0.6096 | 0.0793 |
Upregulated datasets: 2; Downregulated datasets: 0.
Survival by HOXD1 expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of HOXD1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | HOXD1 | 3231 | 9 | 0 | 21 | |
| GSE20123 | HOXD1 | 3231 | 9 | 0 | 21 | |
| GSE43470 | HOXD1 | 3231 | 5 | 1 | 37 | |
| GSE46452 | HOXD1 | 3231 | 1 | 4 | 54 | |
| GSE47630 | HOXD1 | 3231 | 4 | 4 | 32 | |
| GSE54993 | HOXD1 | 3231 | 0 | 5 | 65 | |
| GSE54994 | HOXD1 | 3231 | 11 | 4 | 38 | |
| GSE60625 | HOXD1 | 3231 | 0 | 3 | 8 | |
| GSE74703 | HOXD1 | 3231 | 4 | 1 | 31 | |
| GSE74704 | HOXD1 | 3231 | 5 | 0 | 15 | |
| TCGA | HOXD1 | 3231 | 28 | 5 | 63 |
Total number of gains: 76; Total number of losses: 27; Total Number of normals: 385.
Somatic mutations of HOXD1:
Generating mutation plots.
Highly correlated genes for HOXD1:
Showing all 17 correlated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| HOXD1 | RPS6KA6 | 0.624849 | 3 | 0 | 3 |
| HOXD1 | CRHR2 | 0.601392 | 3 | 0 | 3 |
| HOXD1 | CACNA1F | 0.586997 | 3 | 0 | 3 |
| HOXD1 | HAGLR | 0.582175 | 3 | 0 | 3 |
| HOXD1 | C2orf72 | 0.581534 | 3 | 0 | 3 |
| HOXD1 | ST8SIA2 | 0.57717 | 3 | 0 | 3 |
| HOXD1 | HNF4G | 0.572992 | 3 | 0 | 3 |
| HOXD1 | ESYT3 | 0.565091 | 3 | 0 | 3 |
| HOXD1 | SLC29A3 | 0.558941 | 4 | 0 | 3 |
| HOXD1 | SMKR1 | 0.542961 | 3 | 0 | 3 |
| HOXD1 | GDF9 | 0.540549 | 4 | 0 | 3 |
| HOXD1 | GPC5 | 0.533641 | 4 | 0 | 3 |
| HOXD1 | ECE2 | 0.530517 | 4 | 0 | 3 |
| HOXD1 | ESRRB | 0.529044 | 4 | 0 | 3 |
| HOXD1 | GRTP1 | 0.523684 | 3 | 0 | 3 |
| HOXD1 | FRAT1 | 0.513055 | 4 | 0 | 3 |
| HOXD1 | LY75 | 0.501409 | 4 | 0 | 3 |
For details and further investigation, click here
