| Full name: hippocalcin | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 1p35.1 | ||
| Entrez ID: 3208 | HGNC ID: HGNC:5144 | Ensembl Gene: ENSG00000121905 | OMIM ID: 142622 |
| Drug and gene relationship at DGIdb | |||
Expression of HPCA:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | HPCA | 3208 | 205454_at | 0.0011 | 0.9978 | |
| GSE20347 | HPCA | 3208 | 205454_at | 0.0136 | 0.8595 | |
| GSE23400 | HPCA | 3208 | 205454_at | -0.1168 | 0.0005 | |
| GSE26886 | HPCA | 3208 | 205454_at | 0.1267 | 0.2705 | |
| GSE29001 | HPCA | 3208 | 205454_at | -0.1823 | 0.0718 | |
| GSE38129 | HPCA | 3208 | 205454_at | -0.1293 | 0.0480 | |
| GSE45670 | HPCA | 3208 | 205454_at | -0.0949 | 0.2108 | |
| GSE53622 | HPCA | 3208 | 41986 | -0.3482 | 0.0126 | |
| GSE53624 | HPCA | 3208 | 41986 | -0.0721 | 0.5888 | |
| GSE63941 | HPCA | 3208 | 205454_at | 0.0525 | 0.7872 | |
| GSE77861 | HPCA | 3208 | 205454_at | -0.0793 | 0.5013 | |
| GSE97050 | HPCA | 3208 | A_33_P3246133 | 0.0917 | 0.6505 | |
| TCGA | HPCA | 3208 | RNAseq | 1.0374 | 0.0056 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by HPCA expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of HPCA:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | HPCA | 3208 | 2 | 5 | 23 | |
| GSE20123 | HPCA | 3208 | 2 | 4 | 24 | |
| GSE43470 | HPCA | 3208 | 5 | 6 | 32 | |
| GSE46452 | HPCA | 3208 | 5 | 1 | 53 | |
| GSE47630 | HPCA | 3208 | 8 | 3 | 29 | |
| GSE54993 | HPCA | 3208 | 1 | 1 | 68 | |
| GSE54994 | HPCA | 3208 | 11 | 2 | 40 | |
| GSE60625 | HPCA | 3208 | 0 | 0 | 11 | |
| GSE74703 | HPCA | 3208 | 4 | 3 | 29 | |
| GSE74704 | HPCA | 3208 | 1 | 0 | 19 | |
| TCGA | HPCA | 3208 | 12 | 18 | 66 |
Total number of gains: 51; Total number of losses: 43; Total Number of normals: 394.
Somatic mutations of HPCA:
Generating mutation plots.
Highly correlated genes for HPCA:
Showing top 20/447 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| HPCA | LINC00313 | 0.746964 | 3 | 0 | 3 |
| HPCA | GPR37L1 | 0.727844 | 5 | 0 | 5 |
| HPCA | ZBTB12 | 0.711467 | 3 | 0 | 3 |
| HPCA | KLK14 | 0.707296 | 3 | 0 | 3 |
| HPCA | ATP1A4 | 0.70343 | 4 | 0 | 3 |
| HPCA | PSKH1 | 0.702282 | 4 | 0 | 4 |
| HPCA | CLDND2 | 0.691973 | 3 | 0 | 3 |
| HPCA | C11orf97 | 0.691407 | 3 | 0 | 3 |
| HPCA | LRRC75B | 0.680618 | 3 | 0 | 3 |
| HPCA | FOXP4 | 0.679383 | 4 | 0 | 4 |
| HPCA | SYT5 | 0.679018 | 3 | 0 | 3 |
| HPCA | APC2 | 0.671094 | 4 | 0 | 4 |
| HPCA | KCNK6 | 0.669322 | 3 | 0 | 3 |
| HPCA | KIR2DS1 | 0.667763 | 3 | 0 | 3 |
| HPCA | RHO | 0.66471 | 5 | 0 | 4 |
| HPCA | SARDH | 0.664177 | 6 | 0 | 5 |
| HPCA | SLC28A1 | 0.658231 | 4 | 0 | 4 |
| HPCA | ZBTB7B | 0.657819 | 5 | 0 | 5 |
| HPCA | EPHA3 | 0.656775 | 4 | 0 | 4 |
| HPCA | APOA4 | 0.655104 | 6 | 0 | 6 |
For details and further investigation, click here
