EPHA3

 

Full name: EPH receptor A3 Alias Symbol: HEK|HEK4
Type: protein-coding gene Cytoband: 3p11.1
Entrez ID: 2042 HGNC ID: HGNC:3387 Ensembl Gene: ENSG00000044524 OMIM ID: 179611
Drug and gene relationship at DGIdb
Screen Evidence:
  • This gene has been idenfitied as a common driver in this paper.
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

EPHA3 involved pathways:

KEGG pathway Description View
hsa04360Axon guidance

 

Expression of EPHA3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 EPHA3 2042 206070_s_at -1.0041 0.4215
GSE20347 EPHA3 2042 206070_s_at -0.0277 0.8821
GSE23400 EPHA3 2042 206071_s_at -0.0464 0.1094
GSE26886 EPHA3 2042 206071_s_at 0.0548 0.6626
GSE29001 EPHA3 2042 206071_s_at -0.1305 0.3336
GSE38129 EPHA3 2042 206070_s_at -0.6684 0.0673
GSE45670 EPHA3 2042 206070_s_at -2.4341 0.0000
GSE53622 EPHA3 2042 8582 -0.7556 0.0006
GSE53624 EPHA3 2042 8582 -0.4787 0.0345
GSE63941 EPHA3 2042 206071_s_at 0.1315 0.2757
GSE77861 EPHA3 2042 206071_s_at -0.0535 0.7103
GSE97050 EPHA3 2042 A_23_P169819 -0.5720 0.1123
SRP007169 EPHA3 2042 RNAseq -0.3525 0.5550
SRP008496 EPHA3 2042 RNAseq 0.7923 0.0548
SRP064894 EPHA3 2042 RNAseq 0.2435 0.5814
SRP133303 EPHA3 2042 RNAseq -0.1322 0.7325
SRP159526 EPHA3 2042 RNAseq -0.0214 0.9658
SRP193095 EPHA3 2042 RNAseq 0.2664 0.4033
SRP219564 EPHA3 2042 RNAseq 0.7425 0.3958
TCGA EPHA3 2042 RNAseq -0.5570 0.0103

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by EPHA3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of EPHA3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 EPHA3 2042 3 15 12
GSE20123 EPHA3 2042 3 15 12
GSE43470 EPHA3 2042 4 19 20
GSE46452 EPHA3 2042 4 16 39
GSE47630 EPHA3 2042 6 16 18
GSE54993 EPHA3 2042 4 3 63
GSE54994 EPHA3 2042 4 26 23
GSE60625 EPHA3 2042 0 6 5
GSE74703 EPHA3 2042 4 17 15
GSE74704 EPHA3 2042 2 10 8
TCGA EPHA3 2042 6 65 25

Total number of gains: 40; Total number of losses: 208; Total Number of normals: 240.  


 

Somatic mutations of EPHA3:

 

Generating mutation plots.

 

Highly correlated genes for EPHA3:

 

Showing top 20/800 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
EPHA3RERE0.793336404
EPHA3CYP2U10.79328505
EPHA3SOBP0.783255606
EPHA3NAP1L30.781542606
EPHA3GNG20.775736404
EPHA3TNFSF120.771921303
EPHA3PLCL10.770601707
EPHA3CD99L20.769904303
EPHA3PLN0.764993707
EPHA3AFF10.764891303
EPHA3CNN10.763015504
EPHA3NR2F10.761128303
EPHA3SLIT20.76062707
EPHA3LRCH20.759578505
EPHA3C3orf700.759533505
EPHA3PCDH90.755062605
EPHA3SSPN0.754503606
EPHA3FRZB0.753875808
EPHA3LIX1L0.752435505
EPHA3CCDC300.750252303

For details and further investigation, click here