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Multi-Omics Database of ESCC

 

IMPDH1

 

Full name: inosine monophosphate dehydrogenase 1 Alias Symbol: sWSS2608|LCA11
Type: protein-coding gene Cytoband: 7q32.1
Entrez ID: 3614 HGNC ID: HGNC:6052 Ensembl Gene: ENSG00000106348 OMIM ID: 146690
Drug and gene relationship at DGIdb

 

Expression of IMPDH1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 IMPDH1 3614 204169_at 0.7346 0.0322
GSE20347 IMPDH1 3614 204169_at 0.3726 0.0126
GSE23400 IMPDH1 3614 204169_at 0.2927 0.0000
GSE26886 IMPDH1 3614 204169_at 0.5831 0.0009
GSE29001 IMPDH1 3614 204169_at 0.2568 0.3955
GSE38129 IMPDH1 3614 204169_at 0.4504 0.0000
GSE45670 IMPDH1 3614 204169_at 0.5237 0.0012
GSE53622 IMPDH1 3614 127448 -0.2271 0.0000
GSE53624 IMPDH1 3614 127448 -0.3322 0.0000
GSE63941 IMPDH1 3614 204169_at 0.1903 0.5031
GSE77861 IMPDH1 3614 204169_at 0.6995 0.0132
GSE97050 IMPDH1 3614 A_24_P89701 0.4867 0.1555
SRP007169 IMPDH1 3614 RNAseq 1.4798 0.0006
SRP008496 IMPDH1 3614 RNAseq 1.4031 0.0000
SRP064894 IMPDH1 3614 RNAseq 1.1656 0.0000
SRP133303 IMPDH1 3614 RNAseq 0.9378 0.0000
SRP159526 IMPDH1 3614 RNAseq 0.8095 0.0044
SRP193095 IMPDH1 3614 RNAseq 0.8974 0.0000
SRP219564 IMPDH1 3614 RNAseq 0.6121 0.1346
TCGA IMPDH1 3614 RNAseq 0.0496 0.4693

Upregulated datasets: 3; Downregulated datasets: 0.  


 

Survival by IMPDH1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of IMPDH1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 IMPDH1 3614 8 1 21
GSE20123 IMPDH1 3614 8 2 20
GSE43470 IMPDH1 3614 2 3 38
GSE46452 IMPDH1 3614 7 2 50
GSE47630 IMPDH1 3614 7 4 29
GSE54993 IMPDH1 3614 3 5 62
GSE54994 IMPDH1 3614 6 10 37
GSE60625 IMPDH1 3614 0 0 11
GSE74703 IMPDH1 3614 2 3 31
GSE74704 IMPDH1 3614 4 2 14
TCGA IMPDH1 3614 28 22 46

Total number of gains: 75; Total number of losses: 54; Total Number of normals: 359.  


 

Somatic mutations of IMPDH1:

 

Generating mutation plots.

 

Highly correlated genes for IMPDH1:

 

Showing top 20/559 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
IMPDH1PRICKLE10.776769303
IMPDH1CDCA20.769711404
IMPDH1CTF10.761584404
IMPDH1SLC39A30.756785404
IMPDH1SPIRE10.754841303
IMPDH1PHRF10.75443303
IMPDH1KHSRP0.75158808
IMPDH1IWS10.751362403
IMPDH1KANSL30.744684303
IMPDH1ZNF7890.743016303
IMPDH1TRAF70.741686505
IMPDH1CREB50.741338303
IMPDH1BORA0.740365606
IMPDH1ENG0.739266404
IMPDH1RPL7L10.737594403
IMPDH1ZGPAT0.735122303
IMPDH1ALG10.732887403
IMPDH1NACC10.731697505
IMPDH1TRAF3IP10.723249303
IMPDH1KRTCAP20.722656505

For details and further investigation, click here