ITGA2

 

Full name: integrin subunit alpha 2 Alias Symbol: CD49b
Type: protein-coding gene Cytoband: 5q11.2
Entrez ID: 3673 HGNC ID: HGNC:6137 Ensembl Gene: ENSG00000164171 OMIM ID: 192974
Drug and gene relationship at DGIdb

 

ITGA2 involved pathways:

KEGG pathway Description View
hsa04151PI3K-Akt signaling pathway
hsa04510Focal adhesion
hsa04611Platelet activation
hsa04810Regulation of actin cytoskeleton
hsa05200Pathways in cancer
hsa05205Proteoglycans in cancer
hsa05222Small cell lung cancer

 

Expression of ITGA2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ITGA2 3673 227314_at -0.5657 0.3731
GSE20347 ITGA2 3673 205032_at -0.1103 0.5801
GSE23400 ITGA2 3673 205032_at -0.0590 0.3593
GSE26886 ITGA2 3673 227314_at 0.4260 0.2060
GSE29001 ITGA2 3673 205032_at -0.2570 0.2956
GSE38129 ITGA2 3673 205032_at 0.1562 0.5105
GSE45670 ITGA2 3673 227314_at 0.3349 0.2827
GSE53622 ITGA2 3673 47368 0.4684 0.0021
GSE53624 ITGA2 3673 36450 -0.0598 0.6083
GSE63941 ITGA2 3673 227314_at -0.1320 0.8758
GSE77861 ITGA2 3673 227314_at -0.0443 0.9394
GSE97050 ITGA2 3673 A_32_P178800 0.8214 0.1316
SRP007169 ITGA2 3673 RNAseq 0.8070 0.0579
SRP008496 ITGA2 3673 RNAseq 0.1657 0.6707
SRP064894 ITGA2 3673 RNAseq -0.0911 0.7922
SRP133303 ITGA2 3673 RNAseq 0.5315 0.1062
SRP159526 ITGA2 3673 RNAseq -0.2634 0.4706
SRP193095 ITGA2 3673 RNAseq -0.0017 0.9934
SRP219564 ITGA2 3673 RNAseq -0.3052 0.6672
TCGA ITGA2 3673 RNAseq 0.5313 0.0000

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by ITGA2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ITGA2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ITGA2 3673 1 12 17
GSE20123 ITGA2 3673 1 12 17
GSE43470 ITGA2 3673 1 12 30
GSE46452 ITGA2 3673 1 27 31
GSE47630 ITGA2 3673 2 16 22
GSE54993 ITGA2 3673 8 1 61
GSE54994 ITGA2 3673 5 17 31
GSE60625 ITGA2 3673 0 0 11
GSE74703 ITGA2 3673 1 9 26
GSE74704 ITGA2 3673 1 5 14
TCGA ITGA2 3673 10 45 41

Total number of gains: 31; Total number of losses: 156; Total Number of normals: 301.  


 

Somatic mutations of ITGA2:

 

Generating mutation plots.

 

Highly correlated genes for ITGA2:

 

Showing top 20/240 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ITGA2RNGTT0.774455303
ITGA2JMJD1C0.770815303
ITGA2AP3B10.738495303
ITGA2GLCE0.728089303
ITGA2GAPVD10.722745303
ITGA2FBXO30.713515303
ITGA2DNASE1L10.712541403
ITGA2CPVL0.708358303
ITGA2ASXL20.704573404
ITGA2BLOC1S20.700239303
ITGA2LMAN20.698722303
ITGA2GSTZ10.696131303
ITGA2LY750.693848404
ITGA2WDR410.69361404
ITGA2DNAJB140.691377303
ITGA2METTL90.687604303
ITGA2CLPX0.687205303
ITGA2TBCK0.686721303
ITGA2MAP4K50.686708303
ITGA2MFAP30.686042303

For details and further investigation, click here