| Full name: jumonji and AT-rich interaction domain containing 2 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 6p22.3 | ||
| Entrez ID: 3720 | HGNC ID: HGNC:6196 | Ensembl Gene: ENSG00000008083 | OMIM ID: 601594 |
| Drug and gene relationship at DGIdb | |||
Expression of JARID2:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | JARID2 | 3720 | 203297_s_at | 0.4918 | 0.4050 | |
| GSE20347 | JARID2 | 3720 | 203297_s_at | -0.0084 | 0.9700 | |
| GSE23400 | JARID2 | 3720 | 203298_s_at | 0.2860 | 0.0022 | |
| GSE26886 | JARID2 | 3720 | 203297_s_at | 0.2613 | 0.2627 | |
| GSE29001 | JARID2 | 3720 | 203298_s_at | -0.2282 | 0.2468 | |
| GSE38129 | JARID2 | 3720 | 203297_s_at | 0.1515 | 0.4887 | |
| GSE45670 | JARID2 | 3720 | 203298_s_at | 0.3411 | 0.0186 | |
| GSE53622 | JARID2 | 3720 | 47286 | -0.0553 | 0.5497 | |
| GSE53624 | JARID2 | 3720 | 47286 | -0.2847 | 0.0002 | |
| GSE63941 | JARID2 | 3720 | 203297_s_at | 0.7942 | 0.0458 | |
| GSE77861 | JARID2 | 3720 | 203297_s_at | 0.1596 | 0.5475 | |
| GSE97050 | JARID2 | 3720 | A_23_P214876 | 0.2607 | 0.4183 | |
| SRP007169 | JARID2 | 3720 | RNAseq | -0.0572 | 0.8940 | |
| SRP008496 | JARID2 | 3720 | RNAseq | 0.1202 | 0.6547 | |
| SRP064894 | JARID2 | 3720 | RNAseq | -0.2031 | 0.3642 | |
| SRP133303 | JARID2 | 3720 | RNAseq | 0.0534 | 0.7555 | |
| SRP159526 | JARID2 | 3720 | RNAseq | -0.1866 | 0.3721 | |
| SRP193095 | JARID2 | 3720 | RNAseq | 0.1035 | 0.5569 | |
| SRP219564 | JARID2 | 3720 | RNAseq | -0.1611 | 0.7695 | |
| TCGA | JARID2 | 3720 | RNAseq | 0.2834 | 0.0000 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by JARID2 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of JARID2:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | JARID2 | 3720 | 3 | 6 | 21 | |
| GSE20123 | JARID2 | 3720 | 3 | 6 | 21 | |
| GSE43470 | JARID2 | 3720 | 9 | 0 | 34 | |
| GSE46452 | JARID2 | 3720 | 1 | 10 | 48 | |
| GSE47630 | JARID2 | 3720 | 7 | 7 | 26 | |
| GSE54993 | JARID2 | 3720 | 1 | 1 | 68 | |
| GSE54994 | JARID2 | 3720 | 10 | 4 | 39 | |
| GSE60625 | JARID2 | 3720 | 0 | 1 | 10 | |
| GSE74703 | JARID2 | 3720 | 8 | 0 | 28 | |
| GSE74704 | JARID2 | 3720 | 2 | 2 | 16 | |
| TCGA | JARID2 | 3720 | 16 | 26 | 54 |
Total number of gains: 60; Total number of losses: 63; Total Number of normals: 365.
Somatic mutations of JARID2:
Generating mutation plots.
Highly correlated genes for JARID2:
Showing top 20/338 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| JARID2 | FAM110A | 0.735008 | 3 | 0 | 3 |
| JARID2 | IL1RL2 | 0.684112 | 4 | 0 | 3 |
| JARID2 | RAB38 | 0.680249 | 4 | 0 | 3 |
| JARID2 | STON2 | 0.658291 | 5 | 0 | 4 |
| JARID2 | UNC5B | 0.64798 | 5 | 0 | 4 |
| JARID2 | ARNTL2 | 0.646271 | 4 | 0 | 3 |
| JARID2 | DDX55 | 0.6432 | 3 | 0 | 3 |
| JARID2 | TRPC4AP | 0.637687 | 4 | 0 | 3 |
| JARID2 | RASA2 | 0.636833 | 3 | 0 | 3 |
| JARID2 | PLEKHH1 | 0.635314 | 4 | 0 | 4 |
| JARID2 | GPR160 | 0.634049 | 4 | 0 | 3 |
| JARID2 | ARHGEF5 | 0.627617 | 5 | 0 | 4 |
| JARID2 | TMEM134 | 0.627437 | 5 | 0 | 4 |
| JARID2 | MRPL21 | 0.627033 | 3 | 0 | 3 |
| JARID2 | TRMT6 | 0.624853 | 3 | 0 | 3 |
| JARID2 | SERINC3 | 0.624334 | 3 | 0 | 3 |
| JARID2 | TMEM117 | 0.623813 | 3 | 0 | 3 |
| JARID2 | APRT | 0.622813 | 5 | 0 | 4 |
| JARID2 | PRKCZ | 0.622232 | 5 | 0 | 4 |
| JARID2 | MARVELD2 | 0.619801 | 5 | 0 | 4 |
For details and further investigation, click here
