TRPC4AP

 

Full name: transient receptor potential cation channel subfamily C member 4 associated protein Alias Symbol: DKFZP727M231|DKFZp586C1223|dJ756N5.2|TRRP4AP|PPP1R158
Type: protein-coding gene Cytoband: 20q11.22
Entrez ID: 26133 HGNC ID: HGNC:16181 Ensembl Gene: ENSG00000100991 OMIM ID: 608430
Drug and gene relationship at DGIdb

 

Expression of TRPC4AP:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TRPC4AP 26133 212059_s_at 0.6172 0.1131
GSE20347 TRPC4AP 26133 212059_s_at 0.0711 0.5731
GSE23400 TRPC4AP 26133 212059_s_at 0.0929 0.0071
GSE26886 TRPC4AP 26133 212059_s_at -0.1088 0.5863
GSE29001 TRPC4AP 26133 212059_s_at 0.2438 0.1677
GSE38129 TRPC4AP 26133 212059_s_at 0.1511 0.0876
GSE45670 TRPC4AP 26133 212059_s_at 0.1523 0.1531
GSE53622 TRPC4AP 26133 2525 0.2555 0.0000
GSE53624 TRPC4AP 26133 2525 0.3298 0.0000
GSE63941 TRPC4AP 26133 212059_s_at 0.3822 0.3253
GSE77861 TRPC4AP 26133 212059_s_at 0.1911 0.4725
GSE97050 TRPC4AP 26133 A_23_P154801 0.4135 0.2110
SRP007169 TRPC4AP 26133 RNAseq -0.7207 0.0197
SRP008496 TRPC4AP 26133 RNAseq -0.4950 0.0216
SRP064894 TRPC4AP 26133 RNAseq 0.3988 0.0062
SRP133303 TRPC4AP 26133 RNAseq 0.2825 0.0205
SRP159526 TRPC4AP 26133 RNAseq -0.1809 0.3393
SRP193095 TRPC4AP 26133 RNAseq 0.0888 0.4323
SRP219564 TRPC4AP 26133 RNAseq 0.4182 0.1256
TCGA TRPC4AP 26133 RNAseq -0.0626 0.1456

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by TRPC4AP expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of TRPC4AP:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TRPC4AP 26133 16 0 14
GSE20123 TRPC4AP 26133 16 0 14
GSE43470 TRPC4AP 26133 13 0 30
GSE46452 TRPC4AP 26133 29 0 30
GSE47630 TRPC4AP 26133 25 0 15
GSE54993 TRPC4AP 26133 0 18 52
GSE54994 TRPC4AP 26133 25 0 28
GSE60625 TRPC4AP 26133 0 0 11
GSE74703 TRPC4AP 26133 11 0 25
GSE74704 TRPC4AP 26133 11 0 9
TCGA TRPC4AP 26133 49 3 44

Total number of gains: 195; Total number of losses: 21; Total Number of normals: 272.  


 

Somatic mutations of TRPC4AP:

 

Generating mutation plots.

 

Highly correlated genes for TRPC4AP:

 

Showing top 20/553 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TRPC4APPLEKHO20.765581303
TRPC4APMAPKAP10.765255303
TRPC4APDDX550.745045303
TRPC4APISY10.74263303
TRPC4APZNF8300.73215303
TRPC4APNUP430.731239303
TRPC4APTBC1D40.72864303
TRPC4APSMCR80.726409404
TRPC4APGPR1600.724357303
TRPC4APMOB3C0.723665303
TRPC4APMSTO10.718032303
TRPC4APTNFRSF1A0.717675303
TRPC4APHNRNPM0.715372303
TRPC4APEFEMP20.714366303
TRPC4APGPR137B0.712174303
TRPC4APFGF110.711179303
TRPC4APPDRG10.707977605
TRPC4APA1BG0.703099303
TRPC4APTRMT2A0.702385303
TRPC4APTMEM690.701892303

For details and further investigation, click here