| Full name: TMEM72 antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 10q11.21 | ||
| Entrez ID: 220980 | HGNC ID: HGNC:27349 | Ensembl Gene: ENSG00000224812 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of TMEM72-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TMEM72-AS1 | 220980 | 1563632_at | -0.0249 | 0.9479 | |
| GSE26886 | TMEM72-AS1 | 220980 | 1563632_at | -0.2406 | 0.0327 | |
| GSE45670 | TMEM72-AS1 | 220980 | 1563632_at | -0.0872 | 0.3539 | |
| GSE53622 | TMEM72-AS1 | 220980 | 56696 | -0.0414 | 0.8040 | |
| GSE53624 | TMEM72-AS1 | 220980 | 56696 | 0.1272 | 0.2181 | |
| GSE63941 | TMEM72-AS1 | 220980 | 1563632_at | 0.1195 | 0.4968 | |
| GSE77861 | TMEM72-AS1 | 220980 | 1563632_at | -0.2191 | 0.0627 | |
| SRP133303 | TMEM72-AS1 | 220980 | RNAseq | 0.0909 | 0.5901 | |
| SRP159526 | TMEM72-AS1 | 220980 | RNAseq | 1.3330 | 0.0519 | |
| SRP193095 | TMEM72-AS1 | 220980 | RNAseq | 0.2384 | 0.2297 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by TMEM72-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of TMEM72-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TMEM72-AS1 | 220980 | 3 | 5 | 22 | |
| GSE20123 | TMEM72-AS1 | 220980 | 3 | 5 | 22 | |
| GSE43470 | TMEM72-AS1 | 220980 | 1 | 6 | 36 | |
| GSE46452 | TMEM72-AS1 | 220980 | 0 | 13 | 46 | |
| GSE47630 | TMEM72-AS1 | 220980 | 4 | 12 | 24 | |
| GSE54993 | TMEM72-AS1 | 220980 | 9 | 0 | 61 | |
| GSE54994 | TMEM72-AS1 | 220980 | 2 | 10 | 41 | |
| GSE60625 | TMEM72-AS1 | 220980 | 0 | 0 | 11 | |
| GSE74703 | TMEM72-AS1 | 220980 | 1 | 3 | 32 | |
| GSE74704 | TMEM72-AS1 | 220980 | 2 | 4 | 14 |
Total number of gains: 25; Total number of losses: 58; Total Number of normals: 309.
Somatic mutations of TMEM72-AS1:
Generating mutation plots.
Highly correlated genes for TMEM72-AS1:
Showing top 20/81 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TMEM72-AS1 | VGLL2 | 0.676463 | 4 | 0 | 3 |
| TMEM72-AS1 | SLC25A51 | 0.666331 | 3 | 0 | 3 |
| TMEM72-AS1 | ADAMTSL4 | 0.638053 | 3 | 0 | 3 |
| TMEM72-AS1 | KCNIP2 | 0.637688 | 4 | 0 | 4 |
| TMEM72-AS1 | DNAJB13 | 0.626635 | 3 | 0 | 3 |
| TMEM72-AS1 | OR1D2 | 0.620843 | 4 | 0 | 3 |
| TMEM72-AS1 | RAB4B | 0.606927 | 4 | 0 | 4 |
| TMEM72-AS1 | PALMD | 0.604578 | 3 | 0 | 3 |
| TMEM72-AS1 | LYNX1 | 0.603435 | 4 | 0 | 4 |
| TMEM72-AS1 | RARG | 0.598395 | 4 | 0 | 3 |
| TMEM72-AS1 | CACNA1G-AS1 | 0.598074 | 3 | 0 | 3 |
| TMEM72-AS1 | KLK4 | 0.596147 | 4 | 0 | 3 |
| TMEM72-AS1 | S100A16 | 0.594523 | 3 | 0 | 3 |
| TMEM72-AS1 | SNORA68 | 0.594018 | 3 | 0 | 3 |
| TMEM72-AS1 | TGM5 | 0.589045 | 4 | 0 | 3 |
| TMEM72-AS1 | TMOD3 | 0.588096 | 3 | 0 | 3 |
| TMEM72-AS1 | CNR2 | 0.586021 | 4 | 0 | 3 |
| TMEM72-AS1 | IL17RC | 0.583695 | 4 | 0 | 4 |
| TMEM72-AS1 | IL1RN | 0.582855 | 4 | 0 | 3 |
| TMEM72-AS1 | C2orf72 | 0.581444 | 4 | 0 | 4 |
For details and further investigation, click here
