KCNJ3

 

Full name: potassium inwardly rectifying channel subfamily J member 3 Alias Symbol: Kir3.1|GIRK1|KGA
Type: protein-coding gene Cytoband: 2q24.1
Entrez ID: 3760 HGNC ID: HGNC:6264 Ensembl Gene: ENSG00000162989 OMIM ID: 601534
Drug and gene relationship at DGIdb

 

KCNJ3 involved pathways:

KEGG pathway Description View
hsa04713Circadian entrainment
hsa04723Retrograde endocannabinoid signaling
hsa04724Glutamatergic synapse
hsa04725Cholinergic synapse
hsa04726Serotonergic synapse
hsa04728Dopaminergic synapse
hsa04915Estrogen signaling pathway
hsa04921Oxytocin signaling pathway
hsa05032Morphine addiction

 

Expression of KCNJ3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 KCNJ3 3760 207141_s_at -0.1377 0.6269
GSE20347 KCNJ3 3760 207141_s_at -0.0072 0.9501
GSE23400 KCNJ3 3760 207141_s_at -0.1030 0.0310
GSE26886 KCNJ3 3760 207141_s_at 0.1162 0.4369
GSE29001 KCNJ3 3760 207141_s_at -0.0770 0.7463
GSE38129 KCNJ3 3760 207141_s_at -0.1171 0.2465
GSE45670 KCNJ3 3760 207141_s_at 0.0983 0.3592
GSE53622 KCNJ3 3760 37241 -0.2045 0.3225
GSE53624 KCNJ3 3760 37241 -0.1827 0.1343
GSE63941 KCNJ3 3760 207141_s_at 0.0641 0.7094
GSE77861 KCNJ3 3760 207141_s_at -0.0415 0.7168
SRP133303 KCNJ3 3760 RNAseq 0.1208 0.5050
SRP193095 KCNJ3 3760 RNAseq -0.1028 0.7758
SRP219564 KCNJ3 3760 RNAseq -1.0743 0.1956
TCGA KCNJ3 3760 RNAseq -3.4317 0.0011

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by KCNJ3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of KCNJ3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 KCNJ3 3760 4 2 24
GSE20123 KCNJ3 3760 4 2 24
GSE43470 KCNJ3 3760 3 1 39
GSE46452 KCNJ3 3760 1 4 54
GSE47630 KCNJ3 3760 5 3 32
GSE54993 KCNJ3 3760 0 4 66
GSE54994 KCNJ3 3760 11 2 40
GSE60625 KCNJ3 3760 0 3 8
GSE74703 KCNJ3 3760 2 1 33
GSE74704 KCNJ3 3760 3 0 17
TCGA KCNJ3 3760 21 9 66

Total number of gains: 54; Total number of losses: 31; Total Number of normals: 403.  


 

Somatic mutations of KCNJ3:

 

Generating mutation plots.

 

Highly correlated genes for KCNJ3:

 

Showing top 20/673 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
KCNJ3MASP20.773156303
KCNJ3CC2D2B0.749109303
KCNJ3ADRA1A0.739298303
KCNJ3HEYL0.716231303
KCNJ3BTNL20.714392404
KCNJ3SMCP0.696355606
KCNJ3IL250.694546505
KCNJ3NXPE40.692857505
KCNJ3CRTC10.691594303
KCNJ3GSX10.682302303
KCNJ3SLC5A20.679793403
KCNJ3MYO1A0.678922303
KCNJ3COL11A20.678801404
KCNJ3MC4R0.677154303
KCNJ3PRLR0.674284403
KCNJ3ASB120.672897303
KCNJ3MROH2A0.670172303
KCNJ3CYP11B20.659517303
KCNJ3EPN10.6578303
KCNJ3SLC22A130.657169303

For details and further investigation, click here