Full name: lysine demethylase 4B | Alias Symbol: KIAA0876|TDRD14B | ||
Type: protein-coding gene | Cytoband: 19p13.3 | ||
Entrez ID: 23030 | HGNC ID: HGNC:29136 | Ensembl Gene: ENSG00000127663 | OMIM ID: 609765 |
Drug and gene relationship at DGIdb |
Expression of KDM4B:
Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
---|---|---|---|---|---|---|
GSE17351 | KDM4B | 23030 | 212496_s_at | -0.2972 | 0.5242 | |
GSE20347 | KDM4B | 23030 | 212492_s_at | -0.2342 | 0.1314 | |
GSE23400 | KDM4B | 23030 | 212496_s_at | -0.2593 | 0.0001 | |
GSE26886 | KDM4B | 23030 | 212496_s_at | 0.5270 | 0.0040 | |
GSE29001 | KDM4B | 23030 | 212496_s_at | -0.4757 | 0.2731 | |
GSE38129 | KDM4B | 23030 | 212496_s_at | -0.2127 | 0.0343 | |
GSE45670 | KDM4B | 23030 | 212496_s_at | -0.1012 | 0.5184 | |
GSE53622 | KDM4B | 23030 | 79646 | -0.6208 | 0.0000 | |
GSE53624 | KDM4B | 23030 | 79646 | -0.2901 | 0.0001 | |
GSE63941 | KDM4B | 23030 | 212496_s_at | -0.7898 | 0.1280 | |
GSE77861 | KDM4B | 23030 | 212496_s_at | -0.1473 | 0.5789 | |
GSE97050 | KDM4B | 23030 | A_33_P3319920 | -0.4065 | 0.1313 | |
SRP007169 | KDM4B | 23030 | RNAseq | -0.3500 | 0.3889 | |
SRP008496 | KDM4B | 23030 | RNAseq | -0.4546 | 0.0771 | |
SRP064894 | KDM4B | 23030 | RNAseq | -0.2104 | 0.1371 | |
SRP133303 | KDM4B | 23030 | RNAseq | -0.1626 | 0.2103 | |
SRP159526 | KDM4B | 23030 | RNAseq | -0.4248 | 0.0558 | |
SRP193095 | KDM4B | 23030 | RNAseq | 0.1038 | 0.4856 | |
SRP219564 | KDM4B | 23030 | RNAseq | -0.3714 | 0.2092 | |
TCGA | KDM4B | 23030 | RNAseq | -0.0794 | 0.0960 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by KDM4B expression:
Note: Click image to view full size file.
Copy number change of KDM4B:
Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
---|---|---|---|---|---|---|
GSE15526 | KDM4B | 23030 | 5 | 3 | 22 | |
GSE20123 | KDM4B | 23030 | 4 | 2 | 24 | |
GSE43470 | KDM4B | 23030 | 1 | 8 | 34 | |
GSE46452 | KDM4B | 23030 | 47 | 1 | 11 | |
GSE47630 | KDM4B | 23030 | 5 | 7 | 28 | |
GSE54993 | KDM4B | 23030 | 16 | 3 | 51 | |
GSE54994 | KDM4B | 23030 | 6 | 16 | 31 | |
GSE60625 | KDM4B | 23030 | 9 | 0 | 2 | |
GSE74703 | KDM4B | 23030 | 1 | 5 | 30 | |
GSE74704 | KDM4B | 23030 | 1 | 2 | 17 | |
TCGA | KDM4B | 23030 | 11 | 18 | 67 |
Total number of gains: 106; Total number of losses: 65; Total Number of normals: 317.
Somatic mutations of KDM4B:
Generating mutation plots.
Highly correlated genes for KDM4B:
Showing top 20/461 corelated genes with mean PCC>0.5.
Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
---|---|---|---|---|---|
KDM4B | ZNF564 | 0.749674 | 3 | 0 | 3 |
KDM4B | LCOR | 0.744931 | 3 | 0 | 3 |
KDM4B | RBM4 | 0.74126 | 3 | 0 | 3 |
KDM4B | TXNL4A | 0.740776 | 3 | 0 | 3 |
KDM4B | EVI5L | 0.731293 | 3 | 0 | 3 |
KDM4B | DGCR2 | 0.72912 | 5 | 0 | 5 |
KDM4B | PAN3 | 0.72905 | 3 | 0 | 3 |
KDM4B | ZNF414 | 0.72778 | 3 | 0 | 3 |
KDM4B | EHMT2 | 0.722062 | 3 | 0 | 3 |
KDM4B | TTN | 0.718605 | 3 | 0 | 3 |
KDM4B | DYM | 0.718517 | 3 | 0 | 3 |
KDM4B | SCAMP4 | 0.717961 | 3 | 0 | 3 |
KDM4B | RPS16 | 0.716793 | 3 | 0 | 3 |
KDM4B | ZNF44 | 0.713079 | 3 | 0 | 3 |
KDM4B | ZNF771 | 0.709896 | 3 | 0 | 3 |
KDM4B | LGI2 | 0.706544 | 3 | 0 | 3 |
KDM4B | ARAF | 0.704906 | 3 | 0 | 3 |
KDM4B | SLIT3 | 0.704646 | 3 | 0 | 3 |
KDM4B | MED12 | 0.70312 | 4 | 0 | 3 |
KDM4B | SMG9 | 0.698619 | 3 | 0 | 3 |
For details and further investigation, click here