| Full name: secretory carrier membrane protein 4 | Alias Symbol: FLJ33847 | ||
| Type: protein-coding gene | Cytoband: 19p13.3 | ||
| Entrez ID: 113178 | HGNC ID: HGNC:30385 | Ensembl Gene: ENSG00000227500 | OMIM ID: 613764 |
| Drug and gene relationship at DGIdb | |||
Expression of SCAMP4:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SCAMP4 | 113178 | 213244_at | 0.0357 | 0.9571 | |
| GSE20347 | SCAMP4 | 113178 | 213244_at | -0.1348 | 0.3984 | |
| GSE23400 | SCAMP4 | 113178 | 213244_at | -0.0868 | 0.2962 | |
| GSE26886 | SCAMP4 | 113178 | 213244_at | 0.0423 | 0.7838 | |
| GSE29001 | SCAMP4 | 113178 | 213244_at | -0.3266 | 0.0914 | |
| GSE38129 | SCAMP4 | 113178 | 213244_at | 0.1044 | 0.4055 | |
| GSE45670 | SCAMP4 | 113178 | 213244_at | 0.0097 | 0.9496 | |
| GSE53622 | SCAMP4 | 113178 | 131552 | 0.0264 | 0.7468 | |
| GSE53624 | SCAMP4 | 113178 | 131552 | 0.1022 | 0.1474 | |
| GSE63941 | SCAMP4 | 113178 | 213244_at | -0.0564 | 0.8663 | |
| GSE77861 | SCAMP4 | 113178 | 213244_at | 0.1930 | 0.3685 | |
| GSE97050 | SCAMP4 | 113178 | A_24_P79153 | 0.4478 | 0.3091 | |
| SRP007169 | SCAMP4 | 113178 | RNAseq | -0.5728 | 0.1704 | |
| SRP008496 | SCAMP4 | 113178 | RNAseq | -0.9407 | 0.0011 | |
| SRP064894 | SCAMP4 | 113178 | RNAseq | 0.0800 | 0.7075 | |
| SRP133303 | SCAMP4 | 113178 | RNAseq | -0.1467 | 0.3990 | |
| SRP159526 | SCAMP4 | 113178 | RNAseq | -0.3933 | 0.1499 | |
| SRP193095 | SCAMP4 | 113178 | RNAseq | -0.1323 | 0.3086 | |
| SRP219564 | SCAMP4 | 113178 | RNAseq | 0.0438 | 0.8609 | |
| TCGA | SCAMP4 | 113178 | RNAseq | 0.0513 | 0.2789 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SCAMP4 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SCAMP4:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SCAMP4 | 113178 | 4 | 6 | 20 | |
| GSE20123 | SCAMP4 | 113178 | 4 | 5 | 21 | |
| GSE43470 | SCAMP4 | 113178 | 1 | 10 | 32 | |
| GSE46452 | SCAMP4 | 113178 | 47 | 1 | 11 | |
| GSE47630 | SCAMP4 | 113178 | 5 | 7 | 28 | |
| GSE54993 | SCAMP4 | 113178 | 16 | 3 | 51 | |
| GSE54994 | SCAMP4 | 113178 | 8 | 15 | 30 | |
| GSE60625 | SCAMP4 | 113178 | 9 | 0 | 2 | |
| GSE74703 | SCAMP4 | 113178 | 1 | 7 | 28 | |
| GSE74704 | SCAMP4 | 113178 | 3 | 3 | 14 | |
| TCGA | SCAMP4 | 113178 | 6 | 25 | 65 |
Total number of gains: 104; Total number of losses: 82; Total Number of normals: 302.
Somatic mutations of SCAMP4:
Generating mutation plots.
Highly correlated genes for SCAMP4:
Showing top 20/195 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SCAMP4 | CIDEB | 0.74052 | 3 | 0 | 3 |
| SCAMP4 | ZYX | 0.720353 | 3 | 0 | 3 |
| SCAMP4 | KDM4B | 0.717961 | 3 | 0 | 3 |
| SCAMP4 | GAS6 | 0.702676 | 3 | 0 | 3 |
| SCAMP4 | PPP1R15A | 0.697768 | 3 | 0 | 3 |
| SCAMP4 | GEMIN5 | 0.694687 | 3 | 0 | 3 |
| SCAMP4 | TBC1D9B | 0.692198 | 4 | 0 | 4 |
| SCAMP4 | USP19 | 0.692128 | 3 | 0 | 3 |
| SCAMP4 | PFKL | 0.681934 | 4 | 0 | 4 |
| SCAMP4 | ITPKC | 0.68023 | 3 | 0 | 3 |
| SCAMP4 | PPP1R9B | 0.679973 | 4 | 0 | 3 |
| SCAMP4 | GAK | 0.672809 | 5 | 0 | 3 |
| SCAMP4 | CYB561 | 0.66672 | 4 | 0 | 4 |
| SCAMP4 | CAPN3 | 0.664183 | 3 | 0 | 3 |
| SCAMP4 | HS3ST3A1 | 0.663504 | 4 | 0 | 4 |
| SCAMP4 | ZNF710 | 0.662862 | 4 | 0 | 4 |
| SCAMP4 | CABIN1 | 0.661195 | 4 | 0 | 4 |
| SCAMP4 | GGA3 | 0.661185 | 3 | 0 | 3 |
| SCAMP4 | ZNF490 | 0.659314 | 3 | 0 | 3 |
| SCAMP4 | PTPN23 | 0.658237 | 6 | 0 | 5 |
For details and further investigation, click here
