KRR1

 

Full name: KRR1 small subunit processome component homolog Alias Symbol: RIP-1
Type: protein-coding gene Cytoband: 12q21.2
Entrez ID: 11103 HGNC ID: HGNC:5176 Ensembl Gene: ENSG00000111615 OMIM ID: 612817
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of KRR1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 KRR1 11103 203202_at 0.0731 0.8647
GSE20347 KRR1 11103 203203_s_at 0.2589 0.0517
GSE23400 KRR1 11103 203202_at 0.2423 0.0119
GSE26886 KRR1 11103 203202_at -0.0432 0.8389
GSE29001 KRR1 11103 203202_at 0.2862 0.2754
GSE38129 KRR1 11103 203202_at 0.0007 0.9966
GSE45670 KRR1 11103 203202_at 0.1965 0.0707
GSE53622 KRR1 11103 7035 -0.3194 0.0000
GSE53624 KRR1 11103 7035 -0.0729 0.2447
GSE63941 KRR1 11103 203202_at -0.7150 0.2080
GSE77861 KRR1 11103 203202_at 0.4899 0.2358
GSE97050 KRR1 11103 A_32_P326819 -0.2758 0.2733
SRP007169 KRR1 11103 RNAseq 0.1776 0.6146
SRP008496 KRR1 11103 RNAseq 0.4718 0.0215
SRP064894 KRR1 11103 RNAseq 0.0040 0.9785
SRP133303 KRR1 11103 RNAseq 0.2080 0.1332
SRP159526 KRR1 11103 RNAseq 0.2942 0.2731
SRP193095 KRR1 11103 RNAseq 0.0461 0.6580
SRP219564 KRR1 11103 RNAseq -0.3375 0.2444
TCGA KRR1 11103 RNAseq 0.1123 0.0269

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by KRR1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of KRR1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 KRR1 11103 3 3 24
GSE20123 KRR1 11103 3 3 24
GSE43470 KRR1 11103 3 0 40
GSE46452 KRR1 11103 8 1 50
GSE47630 KRR1 11103 10 1 29
GSE54993 KRR1 11103 0 5 65
GSE54994 KRR1 11103 5 2 46
GSE60625 KRR1 11103 0 0 11
GSE74703 KRR1 11103 3 0 33
GSE74704 KRR1 11103 2 2 16
TCGA KRR1 11103 14 15 67

Total number of gains: 51; Total number of losses: 32; Total Number of normals: 405.  


 

Somatic mutations of KRR1:

 

Generating mutation plots.

 

Highly correlated genes for KRR1:

 

Showing top 20/366 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
KRR1GOLPH30.87683303
KRR1ZSCAN210.808646303
KRR1PPIE0.773822303
KRR1PAIP10.767389404
KRR1METAP1D0.762312303
KRR1ZNF8000.760995303
KRR1HSPB110.752128303
KRR1WDR700.747543404
KRR1BTAF10.745046303
KRR1ERI20.732823303
KRR1EIF50.730717303
KRR1MFN20.728686303
KRR1SNAPC30.72819303
KRR1GNA110.722425303
KRR1DNASE20.720205303
KRR1ZFR0.718483504
KRR1DNAJC130.717614303
KRR1DHX300.715491303
KRR1ASTE10.706683303
KRR1ZNF5580.706045303

For details and further investigation, click here