| Full name: long intergenic non-protein coding RNA 423 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 13q13.1 | ||
| Entrez ID: 100874167 | HGNC ID: HGNC:42758 | Ensembl Gene: ENSG00000226968 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00423:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00423 | 100874167 | 1569728_at | -0.1453 | 0.4931 | |
| GSE26886 | LINC00423 | 100874167 | 1569728_at | -0.1195 | 0.2985 | |
| GSE45670 | LINC00423 | 100874167 | 1569728_at | 0.0480 | 0.5249 | |
| GSE53622 | LINC00423 | 100874167 | 154681 | 0.1099 | 0.1138 | |
| GSE53624 | LINC00423 | 100874167 | 154681 | 0.1840 | 0.0244 | |
| GSE63941 | LINC00423 | 100874167 | 1569728_at | 0.0008 | 0.9968 | |
| GSE77861 | LINC00423 | 100874167 | 1569728_at | -0.1244 | 0.1504 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC00423 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00423:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00423 | 100874167 | 1 | 15 | 14 | |
| GSE20123 | LINC00423 | 100874167 | 1 | 14 | 15 | |
| GSE43470 | LINC00423 | 100874167 | 2 | 13 | 28 | |
| GSE46452 | LINC00423 | 100874167 | 0 | 33 | 26 | |
| GSE47630 | LINC00423 | 100874167 | 2 | 27 | 11 | |
| GSE54993 | LINC00423 | 100874167 | 12 | 2 | 56 | |
| GSE54994 | LINC00423 | 100874167 | 2 | 15 | 36 | |
| GSE60625 | LINC00423 | 100874167 | 0 | 3 | 8 | |
| GSE74703 | LINC00423 | 100874167 | 2 | 10 | 24 | |
| GSE74704 | LINC00423 | 100874167 | 0 | 12 | 8 | |
| TCGA | LINC00423 | 100874167 | 8 | 37 | 51 |
Total number of gains: 30; Total number of losses: 181; Total Number of normals: 277.
Somatic mutations of LINC00423:
Generating mutation plots.
Highly correlated genes for LINC00423:
Showing top 20/49 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00423 | KRT2 | 0.717917 | 3 | 0 | 3 |
| LINC00423 | E2F4 | 0.706851 | 3 | 0 | 3 |
| LINC00423 | EPOR | 0.68646 | 4 | 0 | 4 |
| LINC00423 | ADH6 | 0.672705 | 3 | 0 | 3 |
| LINC00423 | PKNOX2 | 0.664828 | 3 | 0 | 3 |
| LINC00423 | GAL3ST3 | 0.651233 | 3 | 0 | 3 |
| LINC00423 | ZNF589 | 0.636246 | 3 | 0 | 3 |
| LINC00423 | PAX8 | 0.624865 | 3 | 0 | 3 |
| LINC00423 | PDE6G | 0.619655 | 3 | 0 | 3 |
| LINC00423 | LIMD1-AS1 | 0.614885 | 3 | 0 | 3 |
| LINC00423 | ADCYAP1R1 | 0.61345 | 3 | 0 | 3 |
| LINC00423 | ANHX | 0.611162 | 3 | 0 | 3 |
| LINC00423 | P2RX1 | 0.610489 | 3 | 0 | 3 |
| LINC00423 | TMEM95 | 0.602884 | 4 | 0 | 3 |
| LINC00423 | SOX10 | 0.593838 | 3 | 0 | 3 |
| LINC00423 | ARL5C | 0.58736 | 4 | 0 | 3 |
| LINC00423 | RPL34-AS1 | 0.581693 | 4 | 0 | 4 |
| LINC00423 | OPTC | 0.578008 | 4 | 0 | 3 |
| LINC00423 | KRTAP1-5 | 0.575659 | 4 | 0 | 3 |
| LINC00423 | SLC13A2 | 0.573334 | 4 | 0 | 3 |
For details and further investigation, click here
