| Full name: long intergenic non-protein coding RNA 545 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 13q12.3 | ||
| Entrez ID: 440132 | HGNC ID: HGNC:43680 | Ensembl Gene: ENSG00000236094 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00545:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00545 | 440132 | 239781_at | 0.0041 | 0.9924 | |
| GSE26886 | LINC00545 | 440132 | 239781_at | 0.0059 | 0.9535 | |
| GSE45670 | LINC00545 | 440132 | 239781_at | -0.1430 | 0.1334 | |
| GSE53622 | LINC00545 | 440132 | 48095 | -0.5045 | 0.0000 | |
| GSE53624 | LINC00545 | 440132 | 48095 | 0.1112 | 0.2149 | |
| GSE63941 | LINC00545 | 440132 | 239781_at | -1.0104 | 0.0052 | |
| GSE77861 | LINC00545 | 440132 | 239781_at | -0.1199 | 0.1207 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by LINC00545 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00545:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00545 | 440132 | 1 | 14 | 15 | |
| GSE20123 | LINC00545 | 440132 | 1 | 13 | 16 | |
| GSE43470 | LINC00545 | 440132 | 2 | 12 | 29 | |
| GSE46452 | LINC00545 | 440132 | 0 | 33 | 26 | |
| GSE47630 | LINC00545 | 440132 | 2 | 27 | 11 | |
| GSE54993 | LINC00545 | 440132 | 12 | 2 | 56 | |
| GSE54994 | LINC00545 | 440132 | 2 | 15 | 36 | |
| GSE60625 | LINC00545 | 440132 | 0 | 3 | 8 | |
| GSE74703 | LINC00545 | 440132 | 2 | 9 | 25 | |
| GSE74704 | LINC00545 | 440132 | 0 | 11 | 9 | |
| TCGA | LINC00545 | 440132 | 8 | 37 | 51 |
Total number of gains: 30; Total number of losses: 176; Total Number of normals: 282.
Somatic mutations of LINC00545:
Generating mutation plots.
Highly correlated genes for LINC00545:
Showing top 20/42 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00545 | AIPL1 | 0.683218 | 4 | 0 | 4 |
| LINC00545 | FMN2 | 0.659699 | 4 | 0 | 4 |
| LINC00545 | TBKBP1 | 0.648464 | 3 | 0 | 3 |
| LINC00545 | TAL1 | 0.637487 | 4 | 0 | 4 |
| LINC00545 | CHRDL2 | 0.628835 | 3 | 0 | 3 |
| LINC00545 | NR4A3 | 0.622883 | 3 | 0 | 3 |
| LINC00545 | C20orf141 | 0.620112 | 3 | 0 | 3 |
| LINC00545 | ZNF287 | 0.619593 | 3 | 0 | 3 |
| LINC00545 | PAX4 | 0.616641 | 3 | 0 | 3 |
| LINC00545 | C6orf223 | 0.612305 | 3 | 0 | 3 |
| LINC00545 | HSD11B1 | 0.611883 | 3 | 0 | 3 |
| LINC00545 | SMPD1 | 0.610153 | 4 | 0 | 3 |
| LINC00545 | UCP1 | 0.607962 | 3 | 0 | 3 |
| LINC00545 | C21orf62 | 0.606087 | 3 | 0 | 3 |
| LINC00545 | GP9 | 0.597232 | 3 | 0 | 3 |
| LINC00545 | KIR2DS5 | 0.595802 | 3 | 0 | 3 |
| LINC00545 | GRIK5 | 0.593591 | 3 | 0 | 3 |
| LINC00545 | C4BPB | 0.592363 | 3 | 0 | 3 |
| LINC00545 | SPX | 0.586782 | 3 | 0 | 3 |
| LINC00545 | KCNQ3 | 0.577904 | 3 | 0 | 3 |
For details and further investigation, click here
