C20orf141

 

Full name: chromosome 20 open reading frame 141 Alias Symbol: dJ860F19.4
Type: protein-coding gene Cytoband: 20p13
Entrez ID: 128653 HGNC ID: HGNC:16134 Ensembl Gene: ENSG00000258713 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of C20orf141:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 C20orf141 128653 231360_at -0.0533 0.8722
GSE26886 C20orf141 128653 231360_at 0.2641 0.0191
GSE45670 C20orf141 128653 231360_at -0.0103 0.9065
GSE53622 C20orf141 128653 119925 -0.1824 0.0011
GSE53624 C20orf141 128653 119925 -0.4977 0.0000
GSE63941 C20orf141 128653 231360_at 0.2659 0.1002
GSE77861 C20orf141 128653 231360_at 0.0065 0.9773
GSE97050 C20orf141 128653 A_33_P3251462 -0.1127 0.6072
TCGA C20orf141 128653 RNAseq 3.6443 0.0041

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by C20orf141 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of C20orf141:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 C20orf141 128653 12 3 15
GSE20123 C20orf141 128653 13 3 14
GSE43470 C20orf141 128653 10 1 32
GSE46452 C20orf141 128653 26 1 32
GSE47630 C20orf141 128653 18 4 18
GSE54993 C20orf141 128653 2 14 54
GSE54994 C20orf141 128653 24 2 27
GSE60625 C20orf141 128653 0 0 11
GSE74703 C20orf141 128653 9 1 26
GSE74704 C20orf141 128653 8 1 11
TCGA C20orf141 128653 40 11 45

Total number of gains: 162; Total number of losses: 41; Total Number of normals: 285.  


 

Somatic mutations of C20orf141:

 

Generating mutation plots.

 

Highly correlated genes for C20orf141:

 

Showing top 20/533 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
C20orf141LIM20.794251303
C20orf141CCNJL0.779677303
C20orf141DUSP90.769757303
C20orf141GDF70.755553303
C20orf141C8G0.755378404
C20orf141RIMS40.755222404
C20orf141FAM181A0.745961404
C20orf141TMEM1020.743588404
C20orf141SHARPIN0.742795303
C20orf141PPP1R12C0.733484303
C20orf141LRTM10.73254303
C20orf141CALML60.729478303
C20orf141ZC3H100.725171303
C20orf141CELF50.724749303
C20orf141AMN0.721849303
C20orf141LRFN20.721661303
C20orf141RPP250.719992303
C20orf141TRIM170.719653504
C20orf141TNNC20.719013403
C20orf141BRSK10.717204403

For details and further investigation, click here