| Full name: long intergenic non-protein coding RNA 652 | Alias Symbol: HSPC072 | ||
| Type: non-coding RNA | Cytoband: 20p11.23 | ||
| Entrez ID: 29075 | HGNC ID: HGNC:25003 | Ensembl Gene: ENSG00000179935 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00652:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00652 | 29075 | 220747_at | 0.1536 | 0.4762 | |
| GSE20347 | LINC00652 | 29075 | 220747_at | 0.0438 | 0.6343 | |
| GSE23400 | LINC00652 | 29075 | 220747_at | -0.1290 | 0.0020 | |
| GSE26886 | LINC00652 | 29075 | 220747_at | 0.0153 | 0.9196 | |
| GSE29001 | LINC00652 | 29075 | 220747_at | -0.2199 | 0.1994 | |
| GSE38129 | LINC00652 | 29075 | 220747_at | -0.1650 | 0.1121 | |
| GSE45670 | LINC00652 | 29075 | 220747_at | 0.0105 | 0.9387 | |
| GSE53622 | LINC00652 | 29075 | 93086 | 0.3233 | 0.0392 | |
| GSE53624 | LINC00652 | 29075 | 93086 | 0.3070 | 0.0242 | |
| GSE63941 | LINC00652 | 29075 | 220747_at | 0.4648 | 0.0083 | |
| GSE77861 | LINC00652 | 29075 | 220747_at | -0.0680 | 0.5693 | |
| SRP064894 | LINC00652 | 29075 | RNAseq | -0.0997 | 0.6361 | |
| SRP133303 | LINC00652 | 29075 | RNAseq | 0.2229 | 0.0249 | |
| SRP159526 | LINC00652 | 29075 | RNAseq | -0.3642 | 0.4477 | |
| SRP193095 | LINC00652 | 29075 | RNAseq | 0.1873 | 0.1552 | |
| SRP219564 | LINC00652 | 29075 | RNAseq | -0.1235 | 0.8262 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC00652 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00652:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00652 | 29075 | 13 | 2 | 15 | |
| GSE20123 | LINC00652 | 29075 | 13 | 2 | 15 | |
| GSE43470 | LINC00652 | 29075 | 11 | 1 | 31 | |
| GSE46452 | LINC00652 | 29075 | 27 | 1 | 31 | |
| GSE47630 | LINC00652 | 29075 | 17 | 4 | 19 | |
| GSE54993 | LINC00652 | 29075 | 0 | 15 | 55 | |
| GSE54994 | LINC00652 | 29075 | 26 | 2 | 25 | |
| GSE60625 | LINC00652 | 29075 | 0 | 0 | 11 | |
| GSE74703 | LINC00652 | 29075 | 8 | 1 | 27 | |
| GSE74704 | LINC00652 | 29075 | 7 | 2 | 11 | |
| TCGA | LINC00652 | 29075 | 44 | 10 | 42 |
Total number of gains: 166; Total number of losses: 40; Total Number of normals: 282.
Somatic mutations of LINC00652:
Generating mutation plots.
Highly correlated genes for LINC00652:
Showing top 20/516 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00652 | RCVRN | 0.712287 | 3 | 0 | 3 |
| LINC00652 | IL18BP | 0.701742 | 3 | 0 | 3 |
| LINC00652 | C5AR2 | 0.70051 | 3 | 0 | 3 |
| LINC00652 | KIR2DL2 | 0.684328 | 3 | 0 | 3 |
| LINC00652 | RASGRF1 | 0.679824 | 3 | 0 | 3 |
| LINC00652 | AMBP | 0.677786 | 4 | 0 | 3 |
| LINC00652 | CSN3 | 0.668524 | 3 | 0 | 3 |
| LINC00652 | RTEL1 | 0.664884 | 3 | 0 | 3 |
| LINC00652 | SIX6 | 0.661406 | 4 | 0 | 4 |
| LINC00652 | FOXRED2 | 0.659946 | 3 | 0 | 3 |
| LINC00652 | SEMA6B | 0.657747 | 4 | 0 | 4 |
| LINC00652 | CYP19A1 | 0.657122 | 3 | 0 | 3 |
| LINC00652 | CDX2 | 0.65688 | 6 | 0 | 5 |
| LINC00652 | TAS2R1 | 0.651745 | 3 | 0 | 3 |
| LINC00652 | KIAA1614 | 0.651275 | 3 | 0 | 3 |
| LINC00652 | DLEU7-AS1 | 0.646493 | 3 | 0 | 3 |
| LINC00652 | IGF2-AS | 0.643786 | 3 | 0 | 3 |
| LINC00652 | GABRB2 | 0.643207 | 4 | 0 | 3 |
| LINC00652 | PDE1B | 0.642327 | 6 | 0 | 5 |
| LINC00652 | LINC00858 | 0.638673 | 3 | 0 | 3 |
For details and further investigation, click here
