| Full name: long intergenic non-protein coding RNA 844 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 10q21.1 | ||
| Entrez ID: 100507008 | HGNC ID: HGNC:45031 | Ensembl Gene: ENSG00000237949 | OMIM ID: |
Expression of LINC00844:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00844 | 100507008 | 230577_at | -0.1603 | 0.5102 | |
| GSE26886 | LINC00844 | 100507008 | 230577_at | 0.0658 | 0.4620 | |
| GSE45670 | LINC00844 | 100507008 | 230577_at | -0.1744 | 0.0364 | |
| GSE53622 | LINC00844 | 100507008 | 53245 | -0.7884 | 0.0000 | |
| GSE53624 | LINC00844 | 100507008 | 53245 | -1.4909 | 0.0000 | |
| GSE63941 | LINC00844 | 100507008 | 230577_at | -0.1266 | 0.3181 | |
| GSE77861 | LINC00844 | 100507008 | 230577_at | 0.0090 | 0.9347 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by LINC00844 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00844:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00844 | 100507008 | 2 | 6 | 22 | |
| GSE20123 | LINC00844 | 100507008 | 2 | 6 | 22 | |
| GSE43470 | LINC00844 | 100507008 | 2 | 5 | 36 | |
| GSE46452 | LINC00844 | 100507008 | 1 | 11 | 47 | |
| GSE47630 | LINC00844 | 100507008 | 4 | 12 | 24 | |
| GSE54993 | LINC00844 | 100507008 | 9 | 0 | 61 | |
| GSE54994 | LINC00844 | 100507008 | 3 | 10 | 40 | |
| GSE60625 | LINC00844 | 100507008 | 0 | 0 | 11 | |
| GSE74703 | LINC00844 | 100507008 | 2 | 3 | 31 | |
| GSE74704 | LINC00844 | 100507008 | 1 | 4 | 15 | |
| TCGA | LINC00844 | 100507008 | 10 | 23 | 63 |
Total number of gains: 36; Total number of losses: 80; Total Number of normals: 372.
Somatic mutations of LINC00844:
Generating mutation plots.
Highly correlated genes for LINC00844:
Showing top 20/174 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00844 | FGF10 | 0.659443 | 3 | 0 | 3 |
| LINC00844 | PRELP | 0.657421 | 3 | 0 | 3 |
| LINC00844 | PPP1R14A | 0.655926 | 3 | 0 | 3 |
| LINC00844 | SORBS2 | 0.647797 | 3 | 0 | 3 |
| LINC00844 | USP33 | 0.647771 | 3 | 0 | 3 |
| LINC00844 | RAP1A | 0.647035 | 3 | 0 | 3 |
| LINC00844 | SLITRK5 | 0.639469 | 3 | 0 | 3 |
| LINC00844 | C9orf152 | 0.634882 | 3 | 0 | 3 |
| LINC00844 | C1QTNF7 | 0.633181 | 4 | 0 | 3 |
| LINC00844 | PGR | 0.631346 | 4 | 0 | 4 |
| LINC00844 | GALNT16 | 0.629973 | 3 | 0 | 3 |
| LINC00844 | LONRF2 | 0.627894 | 3 | 0 | 3 |
| LINC00844 | CKMT2 | 0.626306 | 3 | 0 | 3 |
| LINC00844 | HSPB6 | 0.621942 | 3 | 0 | 3 |
| LINC00844 | SMTN | 0.620453 | 3 | 0 | 3 |
| LINC00844 | ATP1B2 | 0.618564 | 3 | 0 | 3 |
| LINC00844 | PDZRN4 | 0.616906 | 4 | 0 | 3 |
| LINC00844 | SAP18 | 0.615041 | 3 | 0 | 3 |
| LINC00844 | HSPB8 | 0.611974 | 3 | 0 | 3 |
| LINC00844 | C6 | 0.610587 | 4 | 0 | 3 |
For details and further investigation, click here
