PGR

 

Full name: progesterone receptor Alias Symbol: PR|NR3C3
Type: protein-coding gene Cytoband: 11q22.1
Entrez ID: 5241 HGNC ID: HGNC:8910 Ensembl Gene: ENSG00000082175 OMIM ID: 607311
Drug and gene relationship at DGIdb
Screen Evidence:
  • This gene has been idenfitied as a common driver in this paper.
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

PGR involved pathways:

KEGG pathway Description View
hsa04114Oocyte meiosis
hsa04914Progesterone-mediated oocyte maturation

 

Expression of PGR:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 PGR 5241 228554_at -1.4088 0.2312
GSE20347 PGR 5241 208305_at 0.1082 0.3437
GSE23400 PGR 5241 208305_at -0.0698 0.0010
GSE26886 PGR 5241 228554_at 0.5252 0.2703
GSE29001 PGR 5241 208305_at -0.1374 0.1692
GSE38129 PGR 5241 208305_at -0.0056 0.9633
GSE45670 PGR 5241 228554_at -1.7518 0.0000
GSE53622 PGR 5241 84330 -0.9151 0.0000
GSE53624 PGR 5241 84330 -0.9394 0.0000
GSE63941 PGR 5241 228554_at -0.2713 0.2253
GSE77861 PGR 5241 228554_at 0.0547 0.6049
GSE97050 PGR 5241 A_23_P138938 -0.6086 0.1506
SRP064894 PGR 5241 RNAseq -0.2978 0.4519
SRP133303 PGR 5241 RNAseq -0.6588 0.1676
SRP159526 PGR 5241 RNAseq -0.5557 0.4374
SRP219564 PGR 5241 RNAseq -1.5946 0.1369
TCGA PGR 5241 RNAseq -0.9510 0.0020

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by PGR expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of PGR:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 PGR 5241 4 9 17
GSE20123 PGR 5241 4 9 17
GSE43470 PGR 5241 5 5 33
GSE46452 PGR 5241 5 24 30
GSE47630 PGR 5241 2 19 19
GSE54993 PGR 5241 8 3 59
GSE54994 PGR 5241 6 18 29
GSE60625 PGR 5241 0 3 8
GSE74703 PGR 5241 3 4 29
GSE74704 PGR 5241 4 5 11
TCGA PGR 5241 10 44 42

Total number of gains: 51; Total number of losses: 143; Total Number of normals: 294.  


 

Somatic mutations of PGR:

 

Generating mutation plots.

 

Highly correlated genes for PGR:

 

Showing top 20/932 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
PGRFXYD10.893707303
PGRSORCS10.874189404
PGRADAMTSL10.853812505
PGRSGCA0.843457606
PGRC1QTNF70.841379505
PGRSLIT20.832409505
PGRPPP1R14A0.831443505
PGRPLN0.831198505
PGRIQUB0.826404303
PGRMAMDC20.818951505
PGRILDR20.816748303
PGRMYOM10.816734505
PGRANO50.811971606
PGRASB50.810916505
PGRMYOCD0.809521505
PGRITGA70.808419505
PGRLPP0.807258505
PGRPARD3B0.806267404
PGRAOC30.805653505
PGRPTCHD10.805385505

For details and further investigation, click here