| Full name: long intergenic non-protein coding RNA 870 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 3p13 | ||
| Entrez ID: 201617 | HGNC ID: HGNC:27319 | Ensembl Gene: ENSG00000243083 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00870:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00870 | 201617 | 1557602_at | -0.0517 | 0.8271 | |
| GSE26886 | LINC00870 | 201617 | 1557602_at | 0.0886 | 0.3895 | |
| GSE45670 | LINC00870 | 201617 | 1557602_at | 0.0623 | 0.5084 | |
| GSE53622 | LINC00870 | 201617 | 3862 | -0.2909 | 0.0001 | |
| GSE53624 | LINC00870 | 201617 | 61037 | 0.2971 | 0.0070 | |
| GSE63941 | LINC00870 | 201617 | 1557602_at | 0.1478 | 0.2653 | |
| GSE77861 | LINC00870 | 201617 | 1557602_at | -0.1204 | 0.2029 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC00870 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00870:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00870 | 201617 | 1 | 20 | 9 | |
| GSE20123 | LINC00870 | 201617 | 1 | 20 | 9 | |
| GSE43470 | LINC00870 | 201617 | 0 | 21 | 22 | |
| GSE46452 | LINC00870 | 201617 | 2 | 17 | 40 | |
| GSE47630 | LINC00870 | 201617 | 1 | 23 | 16 | |
| GSE54993 | LINC00870 | 201617 | 4 | 3 | 63 | |
| GSE54994 | LINC00870 | 201617 | 1 | 31 | 21 | |
| GSE60625 | LINC00870 | 201617 | 3 | 1 | 7 | |
| GSE74703 | LINC00870 | 201617 | 0 | 17 | 19 | |
| GSE74704 | LINC00870 | 201617 | 1 | 13 | 6 | |
| TCGA | LINC00870 | 201617 | 1 | 79 | 16 |
Total number of gains: 15; Total number of losses: 245; Total Number of normals: 228.
Somatic mutations of LINC00870:
Generating mutation plots.
Highly correlated genes for LINC00870:
Showing top 20/21 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00870 | NLRP9 | 0.620889 | 3 | 0 | 3 |
| LINC00870 | C17orf50 | 0.611668 | 3 | 0 | 3 |
| LINC00870 | GP9 | 0.611337 | 4 | 0 | 3 |
| LINC00870 | POLD4 | 0.606332 | 3 | 0 | 3 |
| LINC00870 | GLIS3-AS1 | 0.59898 | 3 | 0 | 3 |
| LINC00870 | SLC6A19 | 0.588475 | 3 | 0 | 3 |
| LINC00870 | CYP4F22 | 0.58657 | 3 | 0 | 3 |
| LINC00870 | MYLK2 | 0.57676 | 3 | 0 | 3 |
| LINC00870 | FEV | 0.565975 | 4 | 0 | 3 |
| LINC00870 | ALKBH3-AS1 | 0.565525 | 4 | 0 | 3 |
| LINC00870 | EXOC3L1 | 0.556341 | 3 | 0 | 3 |
| LINC00870 | TMEM106A | 0.554439 | 3 | 0 | 3 |
| LINC00870 | RTN4RL2 | 0.543525 | 4 | 0 | 3 |
| LINC00870 | PGLYRP1 | 0.531727 | 5 | 0 | 3 |
| LINC00870 | CA5A | 0.531691 | 4 | 0 | 3 |
| LINC00870 | C10orf67 | 0.524408 | 4 | 0 | 3 |
| LINC00870 | ATP2A1 | 0.523712 | 5 | 0 | 4 |
| LINC00870 | SPATA3 | 0.521058 | 4 | 0 | 3 |
| LINC00870 | NMUR1 | 0.51288 | 4 | 0 | 3 |
| LINC00870 | INSRR | 0.509784 | 4 | 0 | 3 |
For details and further investigation, click here
