| Full name: long intergenic non-protein coding RNA 907 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 18q12.3 | ||
| Entrez ID: 284260 | HGNC ID: HGNC:44327 | Ensembl Gene: ENSG00000267586 | OMIM ID: |
Expression of LINC00907:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00907 | 284260 | 1561587_at | 0.0360 | 0.8980 | |
| GSE26886 | LINC00907 | 284260 | 1561587_at | -0.0246 | 0.8632 | |
| GSE45670 | LINC00907 | 284260 | 1561587_at | 0.0608 | 0.4679 | |
| GSE53622 | LINC00907 | 284260 | 87516 | -0.0728 | 0.3034 | |
| GSE53624 | LINC00907 | 284260 | 87516 | 0.1105 | 0.0669 | |
| GSE63941 | LINC00907 | 284260 | 1561587_at | -0.0276 | 0.8756 | |
| GSE77861 | LINC00907 | 284260 | 1561587_at | -0.0017 | 0.9880 | |
| SRP133303 | LINC00907 | 284260 | RNAseq | -0.3371 | 0.1640 | |
| SRP193095 | LINC00907 | 284260 | RNAseq | -0.0018 | 0.9914 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC00907 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00907:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00907 | 284260 | 1 | 6 | 23 | |
| GSE20123 | LINC00907 | 284260 | 1 | 6 | 23 | |
| GSE43470 | LINC00907 | 284260 | 0 | 3 | 40 | |
| GSE46452 | LINC00907 | 284260 | 1 | 25 | 33 | |
| GSE47630 | LINC00907 | 284260 | 5 | 20 | 15 | |
| GSE54993 | LINC00907 | 284260 | 8 | 1 | 61 | |
| GSE54994 | LINC00907 | 284260 | 2 | 15 | 36 | |
| GSE60625 | LINC00907 | 284260 | 0 | 4 | 7 | |
| GSE74703 | LINC00907 | 284260 | 0 | 3 | 33 | |
| GSE74704 | LINC00907 | 284260 | 0 | 4 | 16 | |
| TCGA | LINC00907 | 284260 | 14 | 39 | 43 |
Total number of gains: 32; Total number of losses: 126; Total Number of normals: 330.
Somatic mutations of LINC00907:
Generating mutation plots.
Highly correlated genes for LINC00907:
Showing all 18 correlated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00907 | CYP46A1 | 0.640148 | 3 | 0 | 3 |
| LINC00907 | TPSG1 | 0.62545 | 3 | 0 | 3 |
| LINC00907 | IFNA17 | 0.614475 | 3 | 0 | 3 |
| LINC00907 | MPP2 | 0.603551 | 3 | 0 | 3 |
| LINC00907 | GPR26 | 0.594325 | 4 | 0 | 3 |
| LINC00907 | F2RL3 | 0.580667 | 3 | 0 | 3 |
| LINC00907 | ARAF | 0.56385 | 3 | 0 | 3 |
| LINC00907 | PTPRU | 0.562736 | 3 | 0 | 3 |
| LINC00907 | LMAN1L | 0.560866 | 3 | 0 | 3 |
| LINC00907 | NHLRC4 | 0.558193 | 3 | 0 | 3 |
| LINC00907 | TRIML1 | 0.555493 | 3 | 0 | 3 |
| LINC00907 | PKD2L1 | 0.542218 | 4 | 0 | 3 |
| LINC00907 | CLEC1B | 0.533576 | 4 | 0 | 3 |
| LINC00907 | RHOT2 | 0.530389 | 4 | 0 | 3 |
| LINC00907 | NLRP5 | 0.529253 | 4 | 0 | 3 |
| LINC00907 | AANAT | 0.528332 | 5 | 0 | 3 |
| LINC00907 | LINC00308 | 0.517095 | 5 | 0 | 3 |
| LINC00907 | FAM170B-AS1 | 0.516101 | 4 | 0 | 3 |
For details and further investigation, click here
