| Full name: long intergenic non-protein coding RNA 957 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 7p13 | ||
| Entrez ID: 255031 | HGNC ID: HGNC:22332 | Ensembl Gene: ENSG00000235314 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00957:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00957 | 255031 | 1564207_at | -0.5671 | 0.1310 | |
| GSE26886 | LINC00957 | 255031 | 1564207_at | -0.6387 | 0.0016 | |
| GSE45670 | LINC00957 | 255031 | 1564207_at | -0.4373 | 0.0160 | |
| GSE53622 | LINC00957 | 255031 | 60545 | -0.0148 | 0.8251 | |
| GSE53624 | LINC00957 | 255031 | 60545 | 0.0301 | 0.6350 | |
| GSE63941 | LINC00957 | 255031 | 1564207_at | 0.4399 | 0.0390 | |
| GSE77861 | LINC00957 | 255031 | 1564207_at | -0.0851 | 0.6378 | |
| SRP007169 | LINC00957 | 255031 | RNAseq | -2.3350 | 0.0008 | |
| SRP064894 | LINC00957 | 255031 | RNAseq | -1.1705 | 0.0000 | |
| SRP133303 | LINC00957 | 255031 | RNAseq | -0.6512 | 0.0003 | |
| SRP159526 | LINC00957 | 255031 | RNAseq | -1.7362 | 0.0000 | |
| SRP193095 | LINC00957 | 255031 | RNAseq | -0.6116 | 0.0000 | |
| SRP219564 | LINC00957 | 255031 | RNAseq | -1.7220 | 0.0001 |
Upregulated datasets: 0; Downregulated datasets: 4.
Survival by LINC00957 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00957:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00957 | 255031 | 14 | 0 | 16 | |
| GSE20123 | LINC00957 | 255031 | 13 | 0 | 17 | |
| GSE43470 | LINC00957 | 255031 | 4 | 0 | 39 | |
| GSE46452 | LINC00957 | 255031 | 11 | 1 | 47 | |
| GSE47630 | LINC00957 | 255031 | 8 | 1 | 31 | |
| GSE54993 | LINC00957 | 255031 | 0 | 8 | 62 | |
| GSE54994 | LINC00957 | 255031 | 17 | 3 | 33 | |
| GSE60625 | LINC00957 | 255031 | 0 | 0 | 11 | |
| GSE74703 | LINC00957 | 255031 | 4 | 0 | 32 | |
| GSE74704 | LINC00957 | 255031 | 7 | 0 | 13 | |
| TCGA | LINC00957 | 255031 | 52 | 6 | 38 |
Total number of gains: 130; Total number of losses: 19; Total Number of normals: 339.
Somatic mutations of LINC00957:
Generating mutation plots.
Highly correlated genes for LINC00957:
Showing top 20/250 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00957 | SORT1 | 0.75256 | 3 | 0 | 3 |
| LINC00957 | FAM214A | 0.734034 | 3 | 0 | 3 |
| LINC00957 | LMBRD1 | 0.728699 | 3 | 0 | 3 |
| LINC00957 | ACADM | 0.727629 | 3 | 0 | 3 |
| LINC00957 | MAPK3 | 0.724366 | 3 | 0 | 3 |
| LINC00957 | KRT13 | 0.719091 | 3 | 0 | 3 |
| LINC00957 | TMPRSS11B | 0.715258 | 3 | 0 | 3 |
| LINC00957 | CPPED1 | 0.713789 | 3 | 0 | 3 |
| LINC00957 | ENDOU | 0.710961 | 3 | 0 | 3 |
| LINC00957 | HBP1 | 0.710603 | 3 | 0 | 3 |
| LINC00957 | CYP3A43 | 0.70988 | 4 | 0 | 4 |
| LINC00957 | GBP6 | 0.707105 | 3 | 0 | 3 |
| LINC00957 | C5orf66-AS1 | 0.706324 | 3 | 0 | 3 |
| LINC00957 | CAST | 0.706035 | 3 | 0 | 3 |
| LINC00957 | SNORA68 | 0.70519 | 3 | 0 | 3 |
| LINC00957 | FAM189A2 | 0.702471 | 3 | 0 | 3 |
| LINC00957 | SH3GLB1 | 0.700895 | 3 | 0 | 3 |
| LINC00957 | BBOX1 | 0.697035 | 3 | 0 | 3 |
| LINC00957 | HOXA-AS2 | 0.696499 | 3 | 0 | 3 |
| LINC00957 | CLCA4 | 0.696303 | 3 | 0 | 3 |
For details and further investigation, click here
