CR1

 

Full name: complement C3b/C4b receptor 1 (Knops blood group) Alias Symbol: CD35|KN
Type: protein-coding gene Cytoband: 1q32.2
Entrez ID: 1378 HGNC ID: HGNC:2334 Ensembl Gene: ENSG00000203710 OMIM ID: 120620
Drug and gene relationship at DGIdb

 

CR1 involved pathways:

KEGG pathway Description View
hsa05140Leishmaniasis
hsa05152Tuberculosis

 

Expression of CR1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CR1 1378 208488_s_at -0.0937 0.8664
GSE20347 CR1 1378 208488_s_at 0.0492 0.5373
GSE23400 CR1 1378 208488_s_at -0.0325 0.3110
GSE26886 CR1 1378 208488_s_at 0.0473 0.6491
GSE29001 CR1 1378 208488_s_at -0.0502 0.7857
GSE38129 CR1 1378 208488_s_at -0.0440 0.5454
GSE45670 CR1 1378 217484_at -0.0730 0.4710
GSE53622 CR1 1378 10771 -0.7471 0.0002
GSE53624 CR1 1378 10771 -0.5455 0.0013
GSE63941 CR1 1378 208488_s_at -0.0217 0.8942
GSE77861 CR1 1378 208488_s_at -0.0915 0.3380
GSE97050 CR1 1378 A_23_P256821 0.7599 0.2515
SRP007169 CR1 1378 RNAseq 3.6972 0.0000
SRP133303 CR1 1378 RNAseq -0.0284 0.9443
SRP159526 CR1 1378 RNAseq -0.8735 0.3418
SRP193095 CR1 1378 RNAseq 0.8279 0.0095
SRP219564 CR1 1378 RNAseq 1.1945 0.1353
TCGA CR1 1378 RNAseq -0.8851 0.0245

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by CR1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CR1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CR1 1378 11 0 19
GSE20123 CR1 1378 11 0 19
GSE43470 CR1 1378 9 0 34
GSE46452 CR1 1378 3 1 55
GSE47630 CR1 1378 14 0 26
GSE54993 CR1 1378 0 6 64
GSE54994 CR1 1378 14 0 39
GSE60625 CR1 1378 0 0 11
GSE74703 CR1 1378 9 0 27
GSE74704 CR1 1378 5 0 15
TCGA CR1 1378 45 3 48

Total number of gains: 121; Total number of losses: 10; Total Number of normals: 357.  


 

Somatic mutations of CR1:

 

Generating mutation plots.

 

Highly correlated genes for CR1:

 

Showing top 20/333 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CR1GMFG0.773042404
CR1MPEG10.744416504
CR1GIMAP40.721836404
CR1ATP8B40.713756504
CR1AIF10.706571404
CR1C1orf1620.70176404
CR1ARHGAP150.697908303
CR1GAPT0.697818404
CR1IRF80.694382404
CR1DAB20.690342303
CR1PLCL20.68603303
CR1GIMAP20.684118403
CR1LTB0.681724303
CR1GPR340.681297403
CR1GIMAP60.679861404
CR1CYTIP0.678386404
CR1GPR650.67718404
CR1RGS180.672252404
CR1NAGLU0.671817303
CR1MS4A4A0.671702404

For details and further investigation, click here