| Full name: long intergenic non-protein coding RNA 1118 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 2p21 | ||
| Entrez ID: 388948 | HGNC ID: HGNC:49261 | Ensembl Gene: ENSG00000222005 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC01118:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC01118 | 388948 | 237840_at | -0.2209 | 0.3632 | |
| GSE26886 | LINC01118 | 388948 | 237840_at | 0.1970 | 0.1270 | |
| GSE45670 | LINC01118 | 388948 | 237840_at | -0.0319 | 0.7972 | |
| GSE53622 | LINC01118 | 388948 | 25778 | 0.2890 | 0.0619 | |
| GSE53624 | LINC01118 | 388948 | 25778 | 0.3211 | 0.0007 | |
| GSE63941 | LINC01118 | 388948 | 237840_at | 0.3229 | 0.0365 | |
| GSE77861 | LINC01118 | 388948 | 237840_at | -0.0611 | 0.7092 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC01118 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC01118:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC01118 | 388948 | 10 | 1 | 19 | |
| GSE20123 | LINC01118 | 388948 | 8 | 1 | 21 | |
| GSE43470 | LINC01118 | 388948 | 5 | 0 | 38 | |
| GSE46452 | LINC01118 | 388948 | 1 | 4 | 54 | |
| GSE47630 | LINC01118 | 388948 | 7 | 0 | 33 | |
| GSE54993 | LINC01118 | 388948 | 0 | 5 | 65 | |
| GSE54994 | LINC01118 | 388948 | 10 | 0 | 43 | |
| GSE60625 | LINC01118 | 388948 | 0 | 3 | 8 | |
| GSE74703 | LINC01118 | 388948 | 5 | 0 | 31 | |
| GSE74704 | LINC01118 | 388948 | 9 | 1 | 10 |
Total number of gains: 55; Total number of losses: 15; Total Number of normals: 322.
Somatic mutations of LINC01118:
Generating mutation plots.
Highly correlated genes for LINC01118:
Showing top 20/243 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC01118 | GIT1 | 0.693756 | 3 | 0 | 3 |
| LINC01118 | EDDM3A | 0.685896 | 3 | 0 | 3 |
| LINC01118 | GJB1 | 0.677358 | 3 | 0 | 3 |
| LINC01118 | TLL2 | 0.663687 | 4 | 0 | 4 |
| LINC01118 | CACNB2 | 0.662008 | 3 | 0 | 3 |
| LINC01118 | GATA6 | 0.659315 | 3 | 0 | 3 |
| LINC01118 | SPEM1 | 0.652507 | 3 | 0 | 3 |
| LINC01118 | HPX | 0.652104 | 4 | 0 | 4 |
| LINC01118 | SGCA | 0.651156 | 3 | 0 | 3 |
| LINC01118 | FUZ | 0.648962 | 3 | 0 | 3 |
| LINC01118 | C16orf86 | 0.647878 | 4 | 0 | 4 |
| LINC01118 | CAMK2N2 | 0.642421 | 3 | 0 | 3 |
| LINC01118 | ZNF527 | 0.637029 | 4 | 0 | 3 |
| LINC01118 | ZMAT4 | 0.636834 | 3 | 0 | 3 |
| LINC01118 | PRAMEF11 | 0.636269 | 4 | 0 | 4 |
| LINC01118 | SLC5A2 | 0.63566 | 4 | 0 | 3 |
| LINC01118 | SPINT3 | 0.631865 | 4 | 0 | 3 |
| LINC01118 | C11orf72 | 0.630757 | 3 | 0 | 3 |
| LINC01118 | CHRND | 0.630616 | 3 | 0 | 3 |
| LINC01118 | ALPI | 0.629555 | 4 | 0 | 4 |
For details and further investigation, click here
